RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 RASSF7Q02833 373 aa18.51■□□□□ 0.55
PCIF1-201ENST00000372409 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
PCIF1-201ENST00000372409 TMEM119Q4V9L6 283 aa18.51■□□□□ 0.55
PCIF1-201ENST00000372409 CCNI2Q6ZMN8 369 aaPredicted RBP18.51■□□□□ 0.55
PCIF1-201ENST00000372409 NELFCDQ8IXH7 590 aa18.51■□□□□ 0.55
PCIF1-201ENST00000372409 CUL5Q93034 780 aa18.51■□□□□ 0.55
PCIF1-201ENST00000372409 DDX4Q9NQI0 724 aaKnown RBP18.51■□□□□ 0.55
PCIF1-201ENST00000372409 PCDHA12Q9UN75 941 aa18.51■□□□□ 0.55
PCIF1-201ENST00000372409 NCK2O43639 380 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 BUB1O43683 1085 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 SYF2O95926 243 aaKnown RBP18.5■□□□□ 0.55
PCIF1-201ENST00000372409 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
PCIF1-201ENST00000372409 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
PCIF1-201ENST00000372409 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 PSMD2Q13200 908 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 BAP1Q92560 729 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 EHD2Q9NZN4 543 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 FAM26FQ5R3K3 315 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 HAS1Q92839 578 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 LRRC1Q9BTT6 524 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 KANSL2Q9H9L4 492 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 BMP2KQ9NSY1 1161 aaPredicted RBP18.5■□□□□ 0.55
PCIF1-201ENST00000372409 COL4A3BPQ9Y5P4 624 aa18.5■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 HDAC7Q8WUI4 952 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 ZHX3Q9H4I2 956 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 SERPINB13Q9UIV8 391 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 ABCB11O95342 1321 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 E9PMD0 336 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 SNHG28P0DPA3 235 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 SLC1A4P43007 532 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
PCIF1-201ENST00000372409 FKBP3Q00688 224 aaKnown RBP18.49■□□□□ 0.55
PCIF1-201ENST00000372409 SLC7A5Q01650 507 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 ENOX2Q16206 610 aaKnown RBP18.49■□□□□ 0.55
PCIF1-201ENST00000372409 PPP4R3AQ6IN85 833 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 FGFBP2Q9BYJ0 223 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 PSTPIP2Q9H939 334 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 SALL4Q9UJQ4 1053 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 HYOU1Q9Y4L1 999 aa18.49■□□□□ 0.55
PCIF1-201ENST00000372409 BBOX1O75936 387 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 GGCXP38435 758 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 SCNN1DP51172 638 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 DNA2P51530 1060 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 GABPAQ06546 454 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 KCNMA1Q12791 1236 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 SPATA4Q8NEY3 305 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 DNAJC19Q96DA6 116 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 MXD3Q9BW11 206 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 NPHP3-ACAD11A0A0J9YXS1 232 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCIF1-201ENST00000372409 ARID5AQ03989 594 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 EHHADHQ08426 723 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 LRRC4BQ9NT99 713 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
PCIF1-201ENST00000372409 PLIN4Q96Q06 1357 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 LCA5LO95447 670 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 LSM14BQ9BX40 385 aaKnown RBP18.47■□□□□ 0.55
PCIF1-201ENST00000372409 DMGDHQ9UI17 866 aaKnown RBP18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP21Q9UK80 565 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 GYS1P13807 737 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 TCP1P17987 556 aaKnown RBP18.47■□□□□ 0.55
PCIF1-201ENST00000372409 POLR2FP61218 127 aaKnown RBP18.47■□□□□ 0.55
PCIF1-201ENST00000372409 APBA1Q02410 837 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 SND1Q7KZF4 910 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCIF1-201ENST00000372409 PROM2Q8N271 834 aa18.47■□□□□ 0.55
PCIF1-201ENST00000372409 IGKV6D-41A0A0C4DH26 115 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 ZBTB5O15062 677 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 KRT18P05783 430 aaKnown RBP18.46■□□□□ 0.55
PCIF1-201ENST00000372409 PAFAH1B1P43034 410 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 SLC9C1Q4G0N8 1177 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 HERC4Q5GLZ8 1057 aaPredicted RBP18.46■□□□□ 0.55
PCIF1-201ENST00000372409 SFMBT2Q5VUG0 894 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 PPP1R18Q6NYC8 613 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 MMGT1Q8N4V1 131 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 NOX5Q96PH1 765 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 POTEB3A0JP26 581 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 POTECB2RU33 542 aa18.46■□□□□ 0.55
PCIF1-201ENST00000372409 TULP2O00295 520 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms