RNA–Protein interactions for RNA: ENST00000360168.7

SCNN1A-203, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-203ENST00000360168 CCSER1Q9C0I3 900 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 GOLGA6L10A6NI86 522 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 KLHDC7AQ5VTJ3 777 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 LRP6O75581 1613 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 SLC16A2P36021 539 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 KLHL30Q0D2K2 578 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 UHMK1Q8TAS1 419 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 EYA3Q99504 573 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 NR1D1P20393 614 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 HNRNPH1P31943 449 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 HDLBPQ00341 1268 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 MMS22LQ6ZRQ5 1243 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 JPH2Q9BR39 696 aaPredicted RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 MMTAG2Q9BU76 263 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 SEPT11Q9NVA2 429 aaKnown RBP13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 PLAAQ9Y263 795 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 FLT1P17948 1338 aa13.49□□□□□ -0.25
SCNN1A-203ENST00000360168 TMOD1P28289 359 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 GRB10Q13322 594 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 LLGL1Q15334 1064 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 DDB1Q16531 1140 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 KRT79Q5XKE5 535 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 SIK3Q9Y2K2 1263 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 CHD4Q14839 1912 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 COL18A1P39060 1754 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 A0A087X0T9 212 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 FAM228BP0C875 321 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 GNAQP50148 359 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 GRM4Q14833 912 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 SPAG5Q96R06 1193 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 DDX47Q9H0S4 455 aaKnown RBP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 RAD51CO43502 376 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 PAK2Q13177 524 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCNN1A-203ENST00000360168 E9PMD0 336 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 LSP1P33241 339 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 PDXDC1Q6P996 788 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 ZNF804BA4D1E1 1349 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 MEIS1O00470 390 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 COPB2P35606 906 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 FAM43BQ6ZT52 329 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 BCL9O00512 1426 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 GNA11P29992 359 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
SCNN1A-203ENST00000360168 SLIT2O94813 1529 aa13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 TAF1P21675 1872 aa13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 HGSO14964 777 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 TRMT1LQ7Z2T5 733 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.25
SCNN1A-203ENST00000360168 STAT3P40763 770 aa13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 DGKHQ86XP1 1220 aa13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 PNMA5Q96PV4 448 aa13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 PURBQ96QR8 312 aaKnown RBP13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 PANK4Q9NVE7 773 aa13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.26
SCNN1A-203ENST00000360168 TLR2O60603 784 aa13.45□□□□□ -0.26
SCNN1A-203ENST00000360168 CTNNA1P35221 906 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-203ENST00000360168 KCNMA1Q12791 1236 aa13.45□□□□□ -0.26
SCNN1A-203ENST00000360168 ECM1Q16610 540 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms