RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 MYO1BO43795 1136 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 TAL1P17542 331 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-202ENST00000345734 TERF1P54274 439 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 TNIP1Q15025 636 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 AGERQ15109 404 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 PPP1R18Q6NYC8 613 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 SARM1Q6SZW1 724 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 FAM83AQ86UY5 434 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 GMCL1Q96IK5 515 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 TTC12Q9H892 705 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-202ENST00000345734 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 NEMFO60524 1076 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 BMP3P12645 472 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 MSNP26038 577 aaKnown RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 SCNN1AP37088 669 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 TNNI2P48788 182 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 GMPSP49915 693 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 ZNF280AP59817 542 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 MORC3Q14149 939 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 ARMC2Q8NEN0 867 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 SPATA20Q8TB22 786 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 CUL5Q93034 780 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 ASTN2O75129 1339 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 ATAD5Q96QE3 1844 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 LAD1O00515 517 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 TDP2O95551 362 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 OR52Z1P0C646 297 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 DPYDQ12882 1025 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-202ENST00000345734 RASA3Q14644 834 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 SYDE2Q5VT97 1194 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 IQUBQ8NA54 791 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 BAP1Q92560 729 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 HSD3B7Q9H2F3 369 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 PCDHA1Q9Y5I3 950 aa10.42□□□□□ -0.74
ATG4A-202ENST00000345734 SMTNL1A8MU46 457 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 SLC37A4O43826 429 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 S1PR4O95977 384 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 PRPHP41219 470 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L6PQ6QN14 398 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-202ENST00000345734 LRRC15Q8TF66 581 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 PLIN2Q99541 437 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 GLIS2Q9BZE0 524 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-202ENST00000345734 SLC6A16Q9GZN6 736 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 ARHGEF10LQ9HCE6 1279 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 LTBP3Q9NS15 1303 aa10.41□□□□□ -0.74
ATG4A-202ENST00000345734 FZD9O00144 591 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 IKBKBO14920 756 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 SMC2O95347 1197 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 PTGS1P23219 599 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TXLNAP40222 546 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TECP42680 631 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 MRPL12P52815 198 aaKnown RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 FMR1Q06787 632 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 ZYXQ15942 572 aaKnown RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TBC1D10BQ4KMP7 808 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 NAALADL2Q58DX5 795 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 DISC1Q9NRI5 854 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TMX2Q9Y320 296 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 GPSM3Q9Y4H4 160 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 ZNF541Q9H0D2 1346 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 LGR5O75473 907 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 ATP1A3P13637 1013 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 RPS12P25398 132 aaKnown RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CDC25BP30305 580 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CAP2P40123 477 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 UBA7P41226 1012 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 STAT6P42226 847 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 MYL5Q02045 173 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CUL4BQ13620 913 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CCDC144BQ3MJ40 725 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 USH1GQ495M9 461 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 FAM83BQ5T0W9 1011 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TAF3Q5VWG9 929 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 BTNL9Q6UXG8 535 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 PHTF2Q8N3S3 785 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CCDC34Q96HJ3 373 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 MRFAP1L1Q96HT8 127 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 TEPSINQ96N21 525 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 MTMR9Q96QG7 549 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
ATG4A-202ENST00000345734 PRR12Q9ULL5 1215 aa10.4□□□□□ -0.74
ATG4A-202ENST00000345734 GOLGA6L6A8MZA4 724 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 TXKP42681 527 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms