RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 PEX14O75381 377 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 DDAH1O94760 285 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 GJA8P48165 433 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 SNAP25P60880 206 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
TPM3-207ENST00000341372 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
TPM3-207ENST00000341372 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 SHISA4Q96DD7 197 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM3-207ENST00000341372 RNF208Q9H0X6 261 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 HSD3B2P26439 372 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
TPM3-207ENST00000341372 MFSD14CQ5VZR4 134 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 TMTC2Q8N394 836 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 UBA5Q9GZZ9 404 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 A1CFQ9NQ94 594 aaKnown RBP11.91□□□□□ -0.5
TPM3-207ENST00000341372 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
TPM3-207ENST00000341372 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 PGK2P07205 417 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 CYBAP13498 195 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
TPM3-207ENST00000341372 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 MSL3Q8N5Y2 521 aaKnown RBP11.9□□□□□ -0.5
TPM3-207ENST00000341372 FGD4Q96M96 766 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 USP26Q9BXU7 913 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 MAF1Q9H063 256 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
TPM3-207ENST00000341372 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 ALAS1P13196 640 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 EN2P19622 333 aaPredicted RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 MPSTP25325 297 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 FAM133AQ8N9E0 248 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 U2AF1L4Q8WU68 220 aaKnown RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 RIOX1Q9H6W3 641 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 JMJD4Q9H9V9 463 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 HOMER2Q9NSB8 354 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 MCM3APO60318 1980 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 PFASO15067 1338 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 NDUFB5O43674 189 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 SGPL1O95470 568 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 TAL1P17542 331 aaPredicted RBP11.89□□□□□ -0.51
TPM3-207ENST00000341372 CYP2C19P33261 490 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 ANKRD35Q8N283 1001 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 FBXL16Q8N461 479 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
TPM3-207ENST00000341372 FAM13AO94988 1023 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 CCND3P30281 292 aaPredicted RBP11.88□□□□□ -0.51
TPM3-207ENST00000341372 PLCB3Q01970 1234 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 UBE2Q1Q7Z7E8 422 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
TPM3-207ENST00000341372 TRPV1Q8NER1 839 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 PRKD2Q9BZL6 878 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 DDX41Q9UJV9 622 aaKnown RBP11.88□□□□□ -0.51
TPM3-207ENST00000341372 FAN1Q9Y2M0 1017 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 PDE4DIPQ5VU43 2346 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 ABCB11O95342 1321 aa11.88□□□□□ -0.51
TPM3-207ENST00000341372 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 NFIBO00712 420 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 CYTH3O43739 400 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 CALM1P0DP23 149 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 CALM2P0DP24 149 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 CALM3P0DP25 149 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 KIF5BP33176 963 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 DEFB118Q96PH6 123 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 AGXT2Q9BYV1 514 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 DOLKQ9UPQ8 538 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 PCDHGA11Q9Y5H2 935 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 ASTN1O14525 1302 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 ZBTB5O15062 677 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 RCAN1P53805 252 aa11.87□□□□□ -0.51
TPM3-207ENST00000341372 GHRHRQ02643 423 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms