RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CCZ1BP86790 482 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CCZ1P86791 482 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CEBPZQ03701 1054 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 PPP2R5CQ13362 524 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 ARL13BQ3SXY8 428 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 METTL11BQ5VVY1 283 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 C3orf62Q6ZUJ4 267 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 SND1Q7KZF4 910 aaKnown RBP eCLIP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 PEX13Q92968 403 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 L3MBTL3Q96JM7 780 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 EGLN2Q96KS0 407 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 SNX25Q9H3E2 840 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 DDX56Q9NY93 547 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 STIM2Q9P246 746 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 TROQ12816 1431 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CPLX1O14810 134 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 NCK2O43639 380 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PRC1O43663 620 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 STRNO43815 780 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 TSPAN9O75954 239 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 ALAS1P13196 640 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PLCG2P16885 1265 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PPP2R3AQ06190 1150 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 NIPAL4Q0D2K0 466 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 UBE4AQ14139 1066 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 RNF220Q5VTB9 566 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PPP4R4Q6NUP7 873 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 TUBA3EQ6PEY2 450 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 CDKL2Q92772 493 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 GFM2Q969S9 779 aaKnown RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 HIC2Q96JB3 615 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PPP1R13BQ96KQ4 1090 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SYT15Q9BQS2 421 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 FOXP3Q9BZS1 431 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SIRT5Q9NXA8 310 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 MAST1Q9Y2H9 1570 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SLC4A7Q9Y6M7 1214 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PLEKHH2Q8IVE3 1493 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 EIF4E1BA6NMX2 242 aaKnown RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 NOTOA8MTQ0 251 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 GADD45BO75293 160 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 DDHD2O94830 711 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SYF2O95926 243 aaKnown RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 FOSP01100 380 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 CDC25BP30305 580 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 KRT9P35527 623 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 SERPINB8P50452 374 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 AP3M2P53677 418 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 GNGT1P63211 74 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 RALGDSQ12967 914 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 MTX1Q13505 466 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 NR1D2Q14995 579 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PSMD6Q15008 389 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 OTUD7BQ6GQQ9 843 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC62Q6P9F0 684 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 IRGQQ8WZA9 623 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 PIH1D1Q9NWS0 290 aaKnown RBP8.44□□□□□ -1.06
GPNMB-201ENST00000258733 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 GGA2Q9UJY4 613 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 TMEM94Q12767 1356 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 MADDQ8WXG6 1647 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 ZMYM4Q5VZL5 1548 aa8.44□□□□□ -1.06
GPNMB-201ENST00000258733 GOLGA8JA6NMD2 632 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 GOLGA8TH3BQL2 631 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ZNF202O95125 648 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 MAP3K6O95382 1288 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 GOLGA8HP0CJ92 632 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SRGNP10124 158 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SYCP2LQ5T4T6 812 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CAND1Q86VP6 1230 aaKnown RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 MAP7D3Q8IWC1 876 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC148Q8NFR7 591 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SLC39A13Q96H72 371 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 NSMCE3Q96MG7 304 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ANKRD27Q96NW4 1050 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CATSPER2Q96P56 530 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 NAA15Q9BXJ9 866 aaKnown RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 EHMT1Q9H9B1 1298 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HPS4Q9NQG7 708 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 LTBP4Q8N2S1 1624 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TLDC2A0PJX2 215 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 PSDA5PKW4 1024 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 hCG_1984214I3L0E3 225 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC192P0DO97 292 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 PLTPP55058 493 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CETN1Q12798 172 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 RIPK1Q13546 671 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HSP90AA5PQ58FG0 334 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms