RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 GypcQ78HU7 95 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Aggf1Q7TN31 711 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Aoc2Q812C9 757 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Enox1Q8BHR2 643 aaKnown RBP25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gga3Q8BMI3 718 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Nek3Q9R0A5 511 aa25.37■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Rsbn1lD3Z0K6 821 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gm10134F6ZQC6 126 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Sox10Q04888 466 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Pnma5Q5DTT8 618 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Tbc1d31Q6NXY1 996 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Mtss1lQ6P9S0 715 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Ehd2Q8BH64 543 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Ifih1Q8R5F7 1025 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Snrnp35Q9D384 244 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Sgpp1Q9JI99 430 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Nap1l5Q9JJF0 156 aa25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Fxr2Q9WVR4 673 aaKnown RBP25.36■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Prom1O54990 867 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Trappc3lQ4KL14 181 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Kcnc4Q8R1C0 628 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Krt79Q8VED5 531 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Q91WD4 421 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Cfap45Q9D9U9 551 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 NfiaQ02780 532 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 KhsrpQ3U0V1 748 aaKnown RBP25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Mcph1Q7TT79 822 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Cabp7Q91ZM8 215 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 BccipQ9CWI3 316 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Saal1Q9D2C2 474 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Cd274Q9EP73 290 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Pkd2l2Q9JLG4 621 aa25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Ccnt1Q9QWV9 724 aaKnown RBP25.35■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Krt78E9Q0F0 1068 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 AunipE9Q6Z5 340 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Slc39a2G3X943 309 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Pik3r1P26450 724 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Nucb2P81117 420 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Pou2f2Q00196 463 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Clic6Q8BHB9 596 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Iws1Q8C1D8 766 aa25.34■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gm4758L7N258 96 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Tdo2P48776 406 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 PrkczQ02956 592 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Gm1587Q3UT80 123 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Ccna1Q61456 421 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Zfp90Q61967 636 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 P2ry10Q8BFU7 328 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Anks1bQ8BIZ1 1259 aa25.33■■□□□ 1.65
Scn1b-201ENSMUST00000098548 Cntnap2Q9CPW0 1332 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Krt28A6BLY7 462 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Herc3A6H6S0 1050 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pcif1P59114 706 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Clul1Q3ZRW6 464 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Fbxo33Q8VE08 562 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Npm3Q9CPP0 175 aaKnown RBP25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Adgrf4Q9D2L6 698 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Sertad1Q9JL10 236 aa25.32■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pgk2P09041 417 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 RdxP26043 583 aaKnown RBP25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Rasip1Q3U0S6 961 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Mindy4Q3UQI9 744 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Podnl1Q6P3Y9 559 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Camsap3Q80VC9 1252 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ercc6lQ8BHK9 1240 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Caps2Q8BUG5 550 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ago4Q8CJF8 861 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Rassf3Q99P51 232 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pex3Q9QXY9 372 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Spint1Q9R097 507 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pcdh11xF6ZNL5 1338 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Cntnap5cQ0V8T7 1305 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Lrrc32G3XA59 663 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Kcnb1Q03717 857 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Usp13Q5BKP2 858 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Kcnj11Q61743 390 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Abcf1Q6P542 837 aaKnown RBP25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Rusc1Q8BG26 893 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 PdgfcQ8CI19 345 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Tmx1Q8VBT0 278 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Znf687Q9D2D7 1237 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Xpo4Q9ESJ0 1151 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Uchl5Q9WUP7 329 aa25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Twf2Q9Z0P5 349 aaKnown RBP25.31■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Astn1Q61137 1302 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pgap3A2A559 320 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Bpifb4A2BGH0 617 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pcdha4O88689 947 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Stim1P70302 685 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Cntnap5bQ0V8T8 1292 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Cln3Q61124 438 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Fstl1Q62356 306 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Cdc14aQ6GQT0 603 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Dpp9Q8BVG4 862 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Lrrc56Q8K375 552 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Appl2Q8K3G9 662 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Tfr2Q9JKX3 798 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 GsdmeQ9Z2D3 512 aa25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Smchd1Q6P5D8 2007 aaKnown RBP25.3■■□□□ 1.64
Scn1b-201ENSMUST00000098548 AW822073A0A0N4SUK1 652 aa25.29■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms