RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W RSC1P53236 928 aa4.53□□□□□ -1.68
VPS28YPL065W SMC6Q12749 1114 aa4.53□□□□□ -1.68
VPS28YPL065W CLC1P17891 233 aa4.52□□□□□ -1.69
VPS28YPL065W CLB1P24868 471 aa4.52□□□□□ -1.69
VPS28YPL065W SRP72P38688 640 aaKnown RBP4.52□□□□□ -1.69
VPS28YPL065W DIM1P41819 318 aaKnown RBP4.52□□□□□ -1.69
VPS28YPL065W RMD9P53140 646 aaKnown RBP4.52□□□□□ -1.69
VPS28YPL065W KAP120Q02932 1032 aa4.52□□□□□ -1.69
VPS28YPL065W AIM32Q04689 311 aa4.52□□□□□ -1.69
VPS28YPL065W SOV1Q04748 898 aa4.52□□□□□ -1.69
VPS28YPL065W MRPL51Q06090 140 aaPredicted RBP4.52□□□□□ -1.69
VPS28YPL065W YDL009CQ12210 107 aa4.52□□□□□ -1.69
VPS28YPL065W LSP1Q12230 341 aaKnown RBP4.52□□□□□ -1.69
VPS28YPL065W MRS3P10566 314 aa4.51□□□□□ -1.69
VPS28YPL065W BUB3P26449 341 aa4.51□□□□□ -1.69
VPS28YPL065W NIP100P33420 868 aa4.51□□□□□ -1.69
VPS28YPL065W ZIM17P42844 174 aa4.51□□□□□ -1.69
VPS28YPL065W FMS1P50264 508 aa4.51□□□□□ -1.69
VPS28YPL065W RRP45Q05636 305 aaKnown RBP4.51□□□□□ -1.69
VPS28YPL065W DAP1Q12091 152 aa4.51□□□□□ -1.69
VPS28YPL065W CAR1P00812 333 aaKnown RBP4.5□□□□□ -1.69
VPS28YPL065W GPH1P06738 902 aaKnown RBP4.5□□□□□ -1.69
VPS28YPL065W YCR022CP25620 114 aa4.5□□□□□ -1.69
VPS28YPL065W ATS1P31386 333 aa4.5□□□□□ -1.69
VPS28YPL065W PXA2P34230 853 aa4.5□□□□□ -1.69
VPS28YPL065W VHC1P38329 1120 aa4.5□□□□□ -1.69
VPS28YPL065W FAU1P40099 211 aa4.5□□□□□ -1.69
VPS28YPL065W TFG2P41896 400 aaPredicted RBP4.5□□□□□ -1.69
VPS28YPL065W YGL138CP53122 345 aa4.5□□□□□ -1.69
VPS28YPL065W ART5P53244 586 aaKnown RBP4.5□□□□□ -1.69
VPS28YPL065W IRC15Q02733 499 aa4.5□□□□□ -1.69
VPS28YPL065W DON1Q05610 365 aa4.5□□□□□ -1.69
VPS28YPL065W YBR298C-AQ8TGK4 73 aa4.5□□□□□ -1.69
VPS28YPL065W LEU4P06208 619 aaKnown RBP4.49□□□□□ -1.69
VPS28YPL065W RIP1P08067 215 aa4.49□□□□□ -1.69
VPS28YPL065W TFB1P32776 642 aa4.49□□□□□ -1.69
VPS28YPL065W PTR2P32901 601 aa4.49□□□□□ -1.69
VPS28YPL065W CBP4P37267 147 aa4.49□□□□□ -1.69
VPS28YPL065W ARA1P38115 344 aa4.49□□□□□ -1.69
VPS28YPL065W NTC20P38302 140 aaPredicted RBP4.49□□□□□ -1.69
VPS28YPL065W CCT2P39076 527 aaKnown RBP4.49□□□□□ -1.69
VPS28YPL065W URB2P47108 1174 aa4.49□□□□□ -1.69
VPS28YPL065W COS5P47187 383 aa4.49□□□□□ -1.69
VPS28YPL065W RPM2Q02773 1202 aa4.49□□□□□ -1.69
VPS28YPL065W COS7Q07788 383 aa4.49□□□□□ -1.69
VPS28YPL065W YLR278CQ05854 1341 aa4.48□□□□□ -1.69
VPS28YPL065W EXO70P19658 623 aa4.48□□□□□ -1.69
VPS28YPL065W CPR3P25719 182 aa4.48□□□□□ -1.69
VPS28YPL065W NDC1P32500 655 aa4.48□□□□□ -1.69
VPS28YPL065W PRP21P32524 280 aaPredicted RBP4.48□□□□□ -1.69
VPS28YPL065W APE3P37302 537 aaKnown RBP4.48□□□□□ -1.69
VPS28YPL065W TCB2P48231 1178 aa4.48□□□□□ -1.69
VPS28YPL065W YML6P51998 286 aa4.48□□□□□ -1.69
VPS28YPL065W PPT2Q12036 173 aa4.48□□□□□ -1.69
VPS28YPL065W VAM3Q12241 283 aa4.48□□□□□ -1.69
VPS28YPL065W SRV2P17555 526 aaKnown RBP4.47□□□□□ -1.69
VPS28YPL065W FRE2P36033 711 aa4.47□□□□□ -1.69
VPS28YPL065W RRT2P38332 387 aa4.47□□□□□ -1.69
VPS28YPL065W CAK1P43568 368 aaPredicted RBP4.47□□□□□ -1.69
VPS28YPL065W SKO1Q02100 647 aa4.47□□□□□ -1.69
VPS28YPL065W SMA2Q04658 369 aa4.47□□□□□ -1.69
VPS28YPL065W HCR1Q05775 265 aaKnown RBP4.47□□□□□ -1.69
VPS28YPL065W VPS74Q06385 345 aa4.47□□□□□ -1.69
VPS28YPL065W URA4P20051 364 aa4.46□□□□□ -1.7
VPS28YPL065W BEM1P29366 551 aa4.46□□□□□ -1.7
VPS28YPL065W HIR2P32480 875 aa4.46□□□□□ -1.7
VPS28YPL065W GYP6P32806 458 aa4.46□□□□□ -1.7
VPS28YPL065W HAT2P39984 401 aa4.46□□□□□ -1.7
VPS28YPL065W ISC1P40015 477 aaKnown RBP4.46□□□□□ -1.7
VPS28YPL065W RPS0BP46654 252 aaKnown RBP4.46□□□□□ -1.7
VPS28YPL065W GWT1P47026 490 aa4.46□□□□□ -1.7
VPS28YPL065W RTT101P47050 842 aa4.46□□□□□ -1.7
VPS28YPL065W NCS2P53923 493 aaPredicted RBP4.46□□□□□ -1.7
VPS28YPL065W RSA1Q08932 381 aa4.46□□□□□ -1.7
VPS28YPL065W RPL15AP05748 204 aaKnown RBP4.45□□□□□ -1.7
VPS28YPL065W SEC63P14906 663 aa4.45□□□□□ -1.7
VPS28YPL065W MTF1P14908 341 aaKnown RBP4.45□□□□□ -1.7
VPS28YPL065W CPR2P23285 205 aa4.45□□□□□ -1.7
VPS28YPL065W SIN4P32259 974 aa4.45□□□□□ -1.7
VPS28YPL065W REC114P32841 428 aa4.45□□□□□ -1.7
VPS28YPL065W PIM1P36775 1133 aa4.45□□□□□ -1.7
VPS28YPL065W MTC4P38335 694 aaKnown RBP4.45□□□□□ -1.7
VPS28YPL065W SHO1P40073 367 aa4.45□□□□□ -1.7
VPS28YPL065W RPR2P40571 144 aa4.45□□□□□ -1.7
VPS28YPL065W SAS2P40963 338 aa4.45□□□□□ -1.7
VPS28YPL065W ELP2P42935 788 aa4.45□□□□□ -1.7
VPS28YPL065W OGG1P53397 376 aaPredicted RBP4.45□□□□□ -1.7
VPS28YPL065W YIF1P53845 314 aaKnown RBP4.45□□□□□ -1.7
VPS28YPL065W YDR387CQ04162 555 aa4.45□□□□□ -1.7
VPS28YPL065W HSP31Q04432 237 aa4.45□□□□□ -1.7
VPS28YPL065W MDM30Q05930 598 aa4.45□□□□□ -1.7
VPS28YPL065W MDH1P17505 334 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VPS28YPL065W KRE2P27809 442 aa4.44□□□□□ -1.7
VPS28YPL065W SPC110P32380 944 aa4.44□□□□□ -1.7
VPS28YPL065W SLM4P38247 162 aa4.44□□□□□ -1.7
VPS28YPL065W RFC3P38629 340 aa4.44□□□□□ -1.7
VPS28YPL065W TRS85P46944 698 aa4.44□□□□□ -1.7
VPS28YPL065W PCP1P53259 346 aa4.44□□□□□ -1.7
VPS28YPL065W DSL1P53847 754 aa4.44□□□□□ -1.7
VPS28YPL065W ARK1P53974 638 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms