RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	IAH1	P41734	238 aa		11.15	□□□□□ -0.62
DED1	YOR204W	MUP1	P50276	574 aa		11.15	□□□□□ -0.62
DED1	YOR204W	YNR021W	P53723	404 aa	Known RBP	11.15	□□□□□ -0.62
DED1	YOR204W	EGD1	Q02642	157 aa	Known RBP	11.15	□□□□□ -0.62
DED1	YOR204W	MTQ2	Q03920	221 aa	Predicted RBP	11.15	□□□□□ -0.62
DED1	YOR204W	HSP31	Q04432	237 aa		11.15	□□□□□ -0.62
DED1	YOR204W	SNF8	Q12483	233 aa		11.15	□□□□□ -0.62
DED1	YOR204W	BRR1	Q99177	341 aa	Predicted RBP	11.15	□□□□□ -0.62
DED1	YOR204W	SKN1	P33336	771 aa		11.14	□□□□□ -0.63
DED1	YOR204W	ROT2	P38138	954 aa		11.14	□□□□□ -0.63
DED1	YOR204W	IST2	P38250	946 aa		11.14	□□□□□ -0.63
DED1	YOR204W	IMA5	P40884	581 aa		11.14	□□□□□ -0.63
DED1	YOR204W	YJL049W	P47048	450 aa		11.14	□□□□□ -0.63
DED1	YOR204W	EFR3	Q03653	782 aa	Known RBP	11.14	□□□□□ -0.63
DED1	YOR204W	NMD4	Q12129	218 aa		11.14	□□□□□ -0.63
DED1	YOR204W	NHA1	Q99271	985 aa		11.14	□□□□□ -0.63
DED1	YOR204W	MDM35	O60200	86 aa		11.14	□□□□□ -0.63
DED1	YOR204W	RPL24A	P04449	155 aa	Known RBP	11.14	□□□□□ -0.63
DED1	YOR204W	CDC13	P32797	924 aa	Known RBP	11.14	□□□□□ -0.63
DED1	YOR204W	HES1	P35843	434 aa		11.14	□□□□□ -0.63
DED1	YOR204W	APT2	P36973	181 aa		11.14	□□□□□ -0.63
DED1	YOR204W	GYP1	Q08484	637 aa		11.14	□□□□□ -0.63
DED1	YOR204W	NSL1	Q12143	216 aa		11.14	□□□□□ -0.63
DED1	YOR204W	RPN5	Q12250	445 aa	Known RBP	11.14	□□□□□ -0.63
DED1	YOR204W	FUR1	P18562	216 aa	Known RBP	11.13	□□□□□ -0.63
DED1	YOR204W	SEC17	P32602	292 aa		11.13	□□□□□ -0.63
DED1	YOR204W	ERV46	P39727	415 aa		11.13	□□□□□ -0.63
DED1	YOR204W	SEC26	P41810	973 aa	Known RBP	11.13	□□□□□ -0.63
DED1	YOR204W	RUP1	Q12242	671 aa		11.13	□□□□□ -0.63
DED1	YOR204W	PRT1	P06103	763 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	MRP13	P12686	339 aa		11.12	□□□□□ -0.63
DED1	YOR204W	MSS116	P15424	664 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	PHO87	P25360	923 aa		11.12	□□□□□ -0.63
DED1	YOR204W	ADE1	P27616	306 aa		11.12	□□□□□ -0.63
DED1	YOR204W	RGI1	P40043	161 aa	Predicted RBP	11.12	□□□□□ -0.63
DED1	YOR204W	IRC15	Q02733	499 aa		11.12	□□□□□ -0.63
DED1	YOR204W	SWF1	Q04629	336 aa		11.12	□□□□□ -0.63
DED1	YOR204W	YDL129W	Q07555	291 aa		11.12	□□□□□ -0.63
DED1	YOR204W	YOL131W	Q08270	108 aa		11.12	□□□□□ -0.63
DED1	YOR204W	YIG1	Q08956	461 aa		11.12	□□□□□ -0.63
DED1	YOR204W	YLL054C	Q12244	843 aa		11.12	□□□□□ -0.63
DED1	YOR204W	YDR262W	Q12331	272 aa		11.12	□□□□□ -0.63
DED1	YOR204W	LAT1	P12695	482 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	YAP1	P19880	650 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	CSM1	P25651	190 aa		11.12	□□□□□ -0.63
DED1	YOR204W	VPS21	P36017	210 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	PDX3	P38075	228 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	UPF3	P48412	387 aa	Known RBP	11.12	□□□□□ -0.63
DED1	YOR204W	DIA3	P52290	468 aa		11.12	□□□□□ -0.63
DED1	YOR204W	RTS3	P53289	263 aa		11.12	□□□□□ -0.63
DED1	YOR204W	MSC1	Q03104	513 aa		11.12	□□□□□ -0.63
DED1	YOR204W	ATP25	Q03153	612 aa		11.12	□□□□□ -0.63
DED1	YOR204W	TLG1	Q03322	224 aa		11.12	□□□□□ -0.63
DED1	YOR204W	STP3	Q05937	343 aa		11.12	□□□□□ -0.63
DED1	YOR204W	IRA1	P18963	3092 aa		11.11	□□□□□ -0.63
DED1	YOR204W	ATP4	P05626	244 aa		11.11	□□□□□ -0.63
DED1	YOR204W	SYP1	P25623	870 aa	Known RBP	11.11	□□□□□ -0.63
DED1	YOR204W	BUB3	P26449	341 aa		11.11	□□□□□ -0.63
DED1	YOR204W	SPO23	P33757	523 aa		11.11	□□□□□ -0.63
DED1	YOR204W	TDP1	P38319	544 aa		11.11	□□□□□ -0.63
DED1	YOR204W	MNT3	P40549	630 aa		11.11	□□□□□ -0.63
DED1	YOR204W	PMT4	P46971	762 aa		11.11	□□□□□ -0.63
DED1	YOR204W	OPT2	Q06593	877 aa		11.11	□□□□□ -0.63
DED1	YOR204W	RRP40	Q08285	240 aa	Known RBP	11.11	□□□□□ -0.63
DED1	YOR204W	MUM3	Q08750	479 aa		11.11	□□□□□ -0.63
DED1	YOR204W	MLH3	Q12083	715 aa		11.11	□□□□□ -0.63
DED1	YOR204W	RPN6	Q12377	434 aa		11.11	□□□□□ -0.63
DED1	YOR204W	YPR064W	Q12492	139 aa		11.11	□□□□□ -0.63
DED1	YOR204W	RRP12	Q12754	1228 aa	Known RBP	11.11	□□□□□ -0.63
DED1	YOR204W	ALG7	P07286	448 aa		11.1	□□□□□ -0.63
DED1	YOR204W	GAL7	P08431	366 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-LR1	P0C2J4	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-F	P0CX61	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-GR2	P0CX62	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	GCD2	P12754	651 aa	Predicted RBP	11.1	□□□□□ -0.63
DED1	YOR204W	SLM5	P25345	492 aa	Known RBP	11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-C	P25383	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	DPH5	P32469	300 aa	Predicted RBP	11.1	□□□□□ -0.63
DED1	YOR204W	NGG1	P32494	702 aa		11.1	□□□□□ -0.63
DED1	YOR204W	CDC5	P32562	705 aa		11.1	□□□□□ -0.63
DED1	YOR204W	SFA1	P32771	386 aa		11.1	□□□□□ -0.63
DED1	YOR204W	FAD1	P38913	306 aa		11.1	□□□□□ -0.63
DED1	YOR204W	JEM1	P40358	645 aa		11.1	□□□□□ -0.63
DED1	YOR204W	GAB1	P41733	394 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-DR2	Q03483	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	MUS81	Q04149	632 aa	Predicted RBP	11.1	□□□□□ -0.63
DED1	YOR204W	PDR8	Q06149	701 aa		11.1	□□□□□ -0.63
DED1	YOR204W	DIN7	Q12086	430 aa		11.1	□□□□□ -0.63
DED1	YOR204W	YOL107W	Q12239	342 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-B	Q12260	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-OR2	Q12293	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-DR1	Q12392	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-OR1	Q12439	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	TY2A-DR3	Q99303	438 aa		11.1	□□□□□ -0.63
DED1	YOR204W	UNG1	P12887	359 aa		11.09	□□□□□ -0.63
DED1	YOR204W	PET127	P32606	800 aa		11.09	□□□□□ -0.63
DED1	YOR204W	PEX6	P33760	1030 aa		11.09	□□□□□ -0.63
DED1	YOR204W	NOP9	P47077	666 aa	Known RBP	11.09	□□□□□ -0.63
DED1	YOR204W	YNL033W	P53964	284 aa		11.09	□□□□□ -0.63
DED1	YOR204W	YNL019C	P53975	284 aa		11.09	□□□□□ -0.63

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