RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C ACM1Q08981 209 aa8.04□□□□□ -1.12
PUP1YOR157C TRX3P25372 127 aa8.03□□□□□ -1.12
PUP1YOR157C CEP3P40969 608 aa8.03□□□□□ -1.12
PUP1YOR157C YGR067CP53243 804 aa8.03□□□□□ -1.12
PUP1YOR157C SKI8Q02793 397 aaPredicted RBP8.03□□□□□ -1.12
PUP1YOR157C RAD34Q06665 692 aa8.03□□□□□ -1.12
PUP1YOR157C NOB1Q08444 459 aaKnown RBP8.03□□□□□ -1.12
PUP1YOR157C PUS9Q12069 462 aa8.03□□□□□ -1.12
PUP1YOR157C YPL245WQ12179 454 aaKnown RBP8.03□□□□□ -1.12
PUP1YOR157C PRP46Q12417 451 aaPredicted RBP8.03□□□□□ -1.12
PUP1YOR157C YOR032W-AQ8TGS1 66 aa8.03□□□□□ -1.12
PUP1YOR157C GAS1P22146 559 aaKnown RBP8.02□□□□□ -1.13
PUP1YOR157C NUP120P35729 1037 aa8.02□□□□□ -1.13
PUP1YOR157C GRE3P38715 327 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
PUP1YOR157C FRT2P39734 528 aa8.02□□□□□ -1.13
PUP1YOR157C IRC6P43615 237 aa8.02□□□□□ -1.13
PUP1YOR157C MKC7P53379 596 aa8.02□□□□□ -1.13
PUP1YOR157C HST2P53686 357 aa8.02□□□□□ -1.13
PUP1YOR157C BOP3P53958 396 aa8.02□□□□□ -1.13
PUP1YOR157C VPS16Q03308 798 aa8.02□□□□□ -1.13
PUP1YOR157C GAS3Q03655 524 aa8.02□□□□□ -1.13
PUP1YOR157C REX3Q12090 404 aa8.02□□□□□ -1.13
PUP1YOR157C YPR064WQ12492 139 aa8.02□□□□□ -1.13
PUP1YOR157C HXK2P04807 486 aaKnown RBP8.01□□□□□ -1.13
PUP1YOR157C GUK1P15454 187 aaKnown RBP8.01□□□□□ -1.13
PUP1YOR157C TRX2P22803 104 aaKnown RBP8.01□□□□□ -1.13
PUP1YOR157C YJL043WP47053 257 aa8.01□□□□□ -1.13
PUP1YOR157C PDR8Q06149 701 aa8.01□□□□□ -1.13
PUP1YOR157C HDA2Q06629 674 aa8.01□□□□□ -1.13
PUP1YOR157C RUP1Q12242 671 aa8.01□□□□□ -1.13
PUP1YOR157C ZRT2Q12436 422 aa8.01□□□□□ -1.13
PUP1YOR157C CMD1P06787 147 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C YML002WP0CF17 737 aa8□□□□□ -1.13
PUP1YOR157C NPR1P22211 790 aa8□□□□□ -1.13
PUP1YOR157C AMS1P22855 1083 aa8□□□□□ -1.13
PUP1YOR157C APN1P22936 367 aa8□□□□□ -1.13
PUP1YOR157C SEC14P24280 304 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C AAD3P25612 363 aa8□□□□□ -1.13
PUP1YOR157C ERG9P29704 444 aa8□□□□□ -1.13
PUP1YOR157C CRM1P30822 1084 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C MTR2P34232 184 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C MCX1P38323 520 aaPredicted RBP8□□□□□ -1.13
PUP1YOR157C REI1P38344 393 aaPredicted RBP8□□□□□ -1.13
PUP1YOR157C YIL169CP40442 995 aa8□□□□□ -1.13
PUP1YOR157C BUD32P53323 261 aa8□□□□□ -1.13
PUP1YOR157C PDR16P53860 351 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C DMA2P53924 522 aa8□□□□□ -1.13
PUP1YOR157C REC102Q02721 264 aa8□□□□□ -1.13
PUP1YOR157C CGI121Q03705 181 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C REX4Q08237 289 aa8□□□□□ -1.13
PUP1YOR157C PAR32Q12515 295 aaKnown RBP8□□□□□ -1.13
PUP1YOR157C BLM10P43583 2143 aa7.99□□□□□ -1.13
PUP1YOR157C CBF1P17106 351 aa7.99□□□□□ -1.13
PUP1YOR157C DAP2P18962 818 aa7.99□□□□□ -1.13
PUP1YOR157C CKI1P20485 582 aa7.99□□□□□ -1.13
PUP1YOR157C SPS22P25380 463 aa7.99□□□□□ -1.13
PUP1YOR157C YIM1P28625 365 aa7.99□□□□□ -1.13
PUP1YOR157C STO1P34160 861 aaKnown RBP7.99□□□□□ -1.13
PUP1YOR157C ALG3P38179 458 aa7.99□□□□□ -1.13
PUP1YOR157C HOS4P40480 1083 aa7.99□□□□□ -1.13
PUP1YOR157C YRB1P41920 201 aaKnown RBP7.99□□□□□ -1.13
PUP1YOR157C EMC2P47133 292 aaKnown RBP7.99□□□□□ -1.13
PUP1YOR157C LSM3P57743 89 aaKnown RBP7.99□□□□□ -1.13
PUP1YOR157C ADE13Q05911 482 aaKnown RBP7.99□□□□□ -1.13
PUP1YOR157C RSA1Q08932 381 aa7.99□□□□□ -1.13
PUP1YOR157C LEU4P06208 619 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C GCR1P07261 785 aa7.98□□□□□ -1.13
PUP1YOR157C YSF3P0C074 85 aaPredicted RBP7.98□□□□□ -1.13
PUP1YOR157C ARL1P38116 183 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C YER034WP40022 185 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C XBP1P40489 647 aa7.98□□□□□ -1.13
PUP1YOR157C MDV1P47025 714 aa7.98□□□□□ -1.13
PUP1YOR157C YJR141WP47172 347 aaPredicted RBP7.98□□□□□ -1.13
PUP1YOR157C SDT1P53078 280 aa7.98□□□□□ -1.13
PUP1YOR157C CWC22P53333 577 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C UTP6Q02354 440 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C RQC1Q05468 723 aaKnown RBP7.98□□□□□ -1.13
PUP1YOR157C ECI1Q05871 280 aa7.98□□□□□ -1.13
PUP1YOR157C NCE102Q12207 173 aaRIP-Chip data7.98□□□□□ -1.13not detected
PUP1YOR157C YMR030W-AQ3E760 96 aa7.98□□□□□ -1.13
PUP1YOR157C PRT1P06103 763 aaKnown RBP7.97□□□□□ -1.13
PUP1YOR157C RPB4P20433 221 aaPredicted RBP7.97□□□□□ -1.13
PUP1YOR157C ERG8P24521 451 aa7.97□□□□□ -1.13
PUP1YOR157C FUN30P31380 1131 aa7.97□□□□□ -1.13
PUP1YOR157C MDJ1P35191 511 aa7.97□□□□□ -1.13
PUP1YOR157C HES1P35843 434 aa7.97□□□□□ -1.13
PUP1YOR157C AUR1P36107 401 aaPredicted RBP7.97□□□□□ -1.13
PUP1YOR157C CIN1P40987 1014 aa7.97□□□□□ -1.13
PUP1YOR157C PRM10P42946 383 aa7.97□□□□□ -1.13
PUP1YOR157C KTR5P53966 522 aaPredicted RBP7.97□□□□□ -1.13
PUP1YOR157C NHP10Q03435 203 aa7.97□□□□□ -1.13
PUP1YOR157C CRR1Q05790 422 aa7.97□□□□□ -1.13
PUP1YOR157C GAS2Q06135 555 aa7.97□□□□□ -1.13
PUP1YOR157C FLO9P39712 1322 aa7.97□□□□□ -1.13
PUP1YOR157C GPI12P23797 304 aa7.96□□□□□ -1.14
PUP1YOR157C SPB1P25582 841 aaPredicted RBP7.96□□□□□ -1.14
PUP1YOR157C PAP1P29468 568 aaKnown RBP7.96□□□□□ -1.14
PUP1YOR157C PTR2P32901 601 aa7.96□□□□□ -1.14
PUP1YOR157C BNA4P38169 460 aa7.96□□□□□ -1.14
PUP1YOR157C RPE1P46969 238 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms