RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	YBR259W	P38338	688 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	WSC4	P38739	605 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YIL166C	P40445	542 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	COA1	P40452	197 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YFR018C	P43599	363 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	FAR3	P46671	204 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	MAD3	P47074	515 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	COQ5	P49017	307 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	AIF1	P52923	378 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	TEL2	P53038	688 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	NNF2	P53253	936 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	SHY1	P53266	389 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	SLM2	P53955	656 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	SUB1	P54000	292 aa	Known RBP	4.12	□□□□□ -1.75
TRM11	YOL124C	YKR011C	Q02209	353 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YPL113C	Q02961	396 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	NHP10	Q03435	203 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	GOT1	Q03554	138 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	FMN1	Q03778	218 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YMR155W	Q03795	547 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	RCO1	Q04779	684 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	VTA1	Q06263	330 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	SRO7	Q12038	1033 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	CHS5	Q12114	671 aa	Known RBP	4.12	□□□□□ -1.75
TRM11	YOL124C	AHA1	Q12449	350 aa	Known RBP	4.12	□□□□□ -1.75
TRM11	YOL124C	YPL247C	Q12523	523 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	YPT6	Q99260	215 aa		4.12	□□□□□ -1.75
TRM11	YOL124C	MSB2	P32334	1306 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	YPR089W	O13585	888 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	PHO5	P00635	467 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	HEM2	P05373	342 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	CPA1	P07258	411 aa	Known RBP	4.11	□□□□□ -1.75
TRM11	YOL124C	YKR104W	P0CE69	306 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	YMR085W	P0CF18	432 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	NMT1	P14743	455 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	MET8	P15807	274 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	EXO70	P19658	623 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	RPB4	P20433	221 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM11	YOL124C	MRE11	P32829	692 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	PTM1	P32857	523 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	SKT5	P34226	696 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	EMC3	P36039	253 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	GMH1	P36125	273 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
TRM11	YOL124C	SIC1	P38634	284 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	PCL5	P38794	229 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	CYC2	P38909	366 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	YDR089W	P38966	869 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	YJL163C	P46996	555 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	CLD1	P53264	445 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	ZRG17	P53735	605 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	IBD2	P53892	351 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	AQR1	P53943	586 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	OSH6	Q02201	448 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	RMI1	Q02685	241 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	GAS3	Q03655	524 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	CSN9	Q03981	162 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	TRM12	Q04235	462 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	SEC10	Q06245	871 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	VAM6	Q07468	1049 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	ENT4	Q07872	247 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	VPS68	Q12016	184 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	APC9	Q12107	265 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	UBX3	Q12229	455 aa		4.11	□□□□□ -1.75
TRM11	YOL124C	SUC2	P00724	532 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	SPT3	P06844	337 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	YAR066W	P0CX18	203 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	YHR214W	P0CX19	203 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	SEC15	P22224	910 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	SNT1	P25357	1226 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	CIN8	P27895	1000 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	NGG1	P32494	702 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TRM11	YOL124C	ASK1	P35734	292 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	RPF2	P36160	344 aa	Known RBP	4.1	□□□□□ -1.75
TRM11	YOL124C	MRPL37	P36532	105 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	TAE1	P38340	232 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	EFM1	P38732	585 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	UBA4	P38820	440 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	BAT1	P38891	393 aa	Known RBP	4.1	□□□□□ -1.75
TRM11	YOL124C	STB2	P46679	850 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	TIS11	P47977	285 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	NIT3	P49954	291 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	NAS6	P50086	228 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	NBP35	P52920	328 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	DAM1	P53267	343 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	ARP4	P80428	489 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	YML131W	Q03102	365 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	BCH1	Q05029	724 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	YLR413W	Q06689	675 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	GRS2	Q06817	618 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	ATG10	Q07879	167 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	PLB3	Q08108	686 aa		4.1	□□□□□ -1.75
TRM11	YOL124C	RAD3	P06839	778 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	RSR1	P13856	272 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	POL30	P15873	258 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	PRP16	P15938	1071 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	MDM10	P18409	493 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms