RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C URB2P47108 1174 aa2.37□□□□□ -2.03
RPB11YOL005C SRB7P47822 140 aa2.37□□□□□ -2.03
RPB11YOL005C YDL186WP48568 277 aa2.37□□□□□ -2.03
RPB11YOL005C ERP1Q05359 219 aaKnown RBP2.37□□□□□ -2.03
RPB11YOL005C HCR1Q05775 265 aaKnown RBP2.37□□□□□ -2.03
RPB11YOL005C SIL1Q08199 421 aa2.37□□□□□ -2.03
RPB11YOL005C YOL159C-AQ3E769 90 aa2.37□□□□□ -2.03
RPB11YOL005C ATR1P13090 542 aa2.36□□□□□ -2.03
RPB11YOL005C YIM1P28625 365 aa2.36□□□□□ -2.03
RPB11YOL005C NDI1P32340 513 aa2.36□□□□□ -2.03
RPB11YOL005C ERG3P32353 365 aa2.36□□□□□ -2.03
RPB11YOL005C HXT3P32466 567 aaKnown RBP2.36□□□□□ -2.03
RPB11YOL005C SEC66P33754 206 aa2.36□□□□□ -2.03
RPB11YOL005C HCS1P34243 683 aa2.36□□□□□ -2.03
RPB11YOL005C BYE1P36106 594 aa2.36□□□□□ -2.03
RPB11YOL005C YBP1P38315 674 aa2.36□□□□□ -2.03
RPB11YOL005C VHC1P38329 1120 aa2.36□□□□□ -2.03
RPB11YOL005C FAU1P40099 211 aa2.36□□□□□ -2.03
RPB11YOL005C SSU1P41930 458 aa2.36□□□□□ -2.03
RPB11YOL005C YFL067WP43537 175 aa2.36□□□□□ -2.03
RPB11YOL005C AVT4P50944 713 aa2.36□□□□□ -2.03
RPB11YOL005C PCP1P53259 346 aa2.36□□□□□ -2.03
RPB11YOL005C YIF1P53845 314 aaKnown RBP2.36□□□□□ -2.03
RPB11YOL005C DSL1P53847 754 aa2.36□□□□□ -2.03
RPB11YOL005C NCS2P53923 493 aaPredicted RBP2.36□□□□□ -2.03
RPB11YOL005C SLG1P54867 378 aa2.36□□□□□ -2.03
RPB11YOL005C SOV1Q04748 898 aa2.36□□□□□ -2.03
RPB11YOL005C KEL3Q08979 651 aaPredicted RBP2.36□□□□□ -2.03
RPB11YOL005C SPT6P23615 1451 aaKnown RBP2.36□□□□□ -2.03
RPB11YOL005C YRF1-4O13559 1382 aa2.36□□□□□ -2.03
RPB11YOL005C REC107P21651 314 aa2.35□□□□□ -2.03
RPB11YOL005C RPI1P23250 407 aaKnown RBP2.35□□□□□ -2.03
RPB11YOL005C PUT3P25502 979 aaPredicted RBP2.35□□□□□ -2.03
RPB11YOL005C YCR100CP25606 316 aa2.35□□□□□ -2.03
RPB11YOL005C CPR3P25719 182 aa2.35□□□□□ -2.03
RPB11YOL005C MFT1P33441 392 aaKnown RBP2.35□□□□□ -2.03
RPB11YOL005C YCR041WP37265 110 aa2.35□□□□□ -2.03
RPB11YOL005C ARA1P38115 344 aa2.35□□□□□ -2.03
RPB11YOL005C YHR218WP38899 603 aa2.35□□□□□ -2.03
RPB11YOL005C DLD2P46681 530 aaKnown RBP2.35□□□□□ -2.03
RPB11YOL005C COS10P52924 374 aa2.35□□□□□ -2.03
RPB11YOL005C POP6P53218 158 aa2.35□□□□□ -2.03
RPB11YOL005C KTR5P53966 522 aaPredicted RBP2.35□□□□□ -2.03
RPB11YOL005C GIR2Q03768 265 aaPredicted RBP2.35□□□□□ -2.03
RPB11YOL005C SPC19Q03954 165 aa2.35□□□□□ -2.03
RPB11YOL005C YDR387CQ04162 555 aa2.35□□□□□ -2.03
RPB11YOL005C TAP42Q04372 366 aa2.35□□□□□ -2.03
RPB11YOL005C VTA1Q06263 330 aa2.35□□□□□ -2.03
RPB11YOL005C SFI1Q12369 946 aa2.35□□□□□ -2.03
RPB11YOL005C CTF3Q12748 733 aa2.35□□□□□ -2.03
RPB11YOL005C YLR278CQ05854 1341 aa2.35□□□□□ -2.03
RPB11YOL005C HSL1P34244 1518 aa2.34□□□□□ -2.03
RPB11YOL005C SAM1P10659 382 aaKnown RBP2.34□□□□□ -2.03
RPB11YOL005C SAM2P19358 384 aaKnown RBP2.34□□□□□ -2.03
RPB11YOL005C APE2P32454 952 aaKnown RBP2.34□□□□□ -2.03
RPB11YOL005C MRP4P32902 394 aa2.34□□□□□ -2.03
RPB11YOL005C NIP100P33420 868 aa2.34□□□□□ -2.03
RPB11YOL005C YMR147WP40218 223 aaKnown RBP2.34□□□□□ -2.03
RPB11YOL005C MKT1P40850 830 aaKnown RBP2.34□□□□□ -2.03
RPB11YOL005C CAF40P53829 373 aa2.34□□□□□ -2.03
RPB11YOL005C RPA49Q01080 415 aaPredicted RBP2.34□□□□□ -2.03
RPB11YOL005C PNG1Q02890 363 aa2.34□□□□□ -2.03
RPB11YOL005C SCW10Q04951 389 aa2.34□□□□□ -2.03
RPB11YOL005C MUM3Q08750 479 aa2.34□□□□□ -2.03
RPB11YOL005C YPL199CQ08954 240 aa2.34□□□□□ -2.03
RPB11YOL005C SCM3Q12334 223 aa2.34□□□□□ -2.03
RPB11YOL005C GLC7P32598 312 aaKnown RBP2.33□□□□□ -2.04
RPB11YOL005C RGT1P32862 1170 aa2.33□□□□□ -2.04
RPB11YOL005C LOS1P33418 1100 aaPredicted RBP2.33□□□□□ -2.04
RPB11YOL005C NAT2P37293 288 aa2.33□□□□□ -2.04
RPB11YOL005C NTC20P38302 140 aaPredicted RBP2.33□□□□□ -2.04
RPB11YOL005C PCA1P38360 1216 aa2.33□□□□□ -2.04
RPB11YOL005C YJL132WP47014 750 aa2.33□□□□□ -2.04
RPB11YOL005C FMS1P50264 508 aa2.33□□□□□ -2.04
RPB11YOL005C YGL138CP53122 345 aa2.33□□□□□ -2.04
RPB11YOL005C GOR1P53839 350 aa2.33□□□□□ -2.04
RPB11YOL005C IMP4P53941 290 aaKnown RBP2.33□□□□□ -2.04
RPB11YOL005C ARX1Q03862 593 aaKnown RBP2.33□□□□□ -2.04
RPB11YOL005C HSP31Q04432 237 aa2.33□□□□□ -2.04
RPB11YOL005C RRP45Q05636 305 aaKnown RBP2.33□□□□□ -2.04
RPB11YOL005C PGA3Q12746 312 aaKnown RBP2.33□□□□□ -2.04
RPB11YOL005C YCL021W-AQ96VH3 125 aa2.33□□□□□ -2.04
RPB11YOL005C TAF2P23255 1407 aa2.33□□□□□ -2.04
RPB11YOL005C GPH1P06738 902 aaKnown RBP2.32□□□□□ -2.04
RPB11YOL005C LPD1P09624 499 aaKnown RBP2.32□□□□□ -2.04
RPB11YOL005C CRM1P30822 1084 aaKnown RBP2.32□□□□□ -2.04
RPB11YOL005C RML2P32611 393 aa2.32□□□□□ -2.04
RPB11YOL005C GCD10P41814 478 aa2.32□□□□□ -2.04
RPB11YOL005C TFG2P41896 400 aaPredicted RBP2.32□□□□□ -2.04
RPB11YOL005C IDP2P41939 412 aa2.32□□□□□ -2.04
RPB11YOL005C RPS0BP46654 252 aaKnown RBP2.32□□□□□ -2.04
RPB11YOL005C YIP1P53039 248 aa2.32□□□□□ -2.04
RPB11YOL005C OGG1P53397 376 aaPredicted RBP2.32□□□□□ -2.04
RPB11YOL005C HEL2Q05580 639 aaKnown RBP2.32□□□□□ -2.04
RPB11YOL005C AFI1Q99222 893 aa2.32□□□□□ -2.04
RPB11YOL005C HIP1P06775 603 aa2.31□□□□□ -2.04
RPB11YOL005C CLC1P17891 233 aa2.31□□□□□ -2.04
RPB11YOL005C YCR051WP25631 222 aa2.31□□□□□ -2.04
RPB11YOL005C BEM1P29366 551 aa2.31□□□□□ -2.04
RPB11YOL005C PRP21P32524 280 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms