RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	HXT9	P40885	567 aa		4.77	□□□□□ -1.65
PCL1	YNL289W	YFR020W	P43600	232 aa		4.77	□□□□□ -1.65
PCL1	YNL289W	YJR054W	P47114	497 aa		4.77	□□□□□ -1.65
PCL1	YNL289W	COS5	P47187	383 aa		4.77	□□□□□ -1.65
PCL1	YNL289W	TSR1	Q07381	788 aa	Known RBP	4.77	□□□□□ -1.65
PCL1	YNL289W	APL5	Q08951	932 aa	Known RBP	4.77	□□□□□ -1.65
PCL1	YNL289W	TRM8	Q12009	286 aa		4.77	□□□□□ -1.65
PCL1	YNL289W	RAP1	P11938	827 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	PHO13	P19881	312 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	CLB2	P24869	491 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	SAC1	P32368	623 aa	Known RBP	4.76	□□□□□ -1.65
PCL1	YNL289W	TKL2	P33315	681 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	PTH2	P34222	208 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	DSE1	P40077	573 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	YTA12	P40341	825 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	MOB1	P40484	314 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	IML2	P47031	731 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	SGF73	P53165	657 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	DRN1	P53255	507 aa	Known RBP	4.76	□□□□□ -1.65
PCL1	YNL289W	GTR1	Q00582	310 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	GYL1	Q04322	720 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	YDR278C	Q05612	105 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	UTP21	Q06078	939 aa	Predicted RBP	4.76	□□□□□ -1.65
PCL1	YNL289W	YPR078C	Q06813	372 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	YOL159C	Q08300	171 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	DDC1	Q08949	612 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	GPM2	Q12008	311 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	VPS54	Q12071	889 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	ERG27	Q12452	347 aa	Known RBP	4.76	□□□□□ -1.65
PCL1	YNL289W	YOR019W	Q99248	730 aa		4.76	□□□□□ -1.65
PCL1	YNL289W	CDC33	P07260	213 aa	Known RBP	4.75	□□□□□ -1.65
PCL1	YNL289W	KAR3	P17119	729 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	VPH1	P32563	840 aa	Known RBP	4.75	□□□□□ -1.65
PCL1	YNL289W	COY1	P34237	679 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	TEF4	P36008	412 aa	Known RBP	4.75	□□□□□ -1.65
PCL1	YNL289W	DUG2	P38149	878 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	YAT2	P40017	923 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	VRG4	P40107	337 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	PHO86	P46956	311 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	VPS75	P53853	264 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	ARO80	Q04052	950 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	YMR254C	Q04838	102 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	YLR287C	Q05881	355 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	VID22	Q05934	901 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	MCP2	Q06567	569 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	DIS3	Q08162	1001 aa	Known RBP	4.75	□□□□□ -1.65
PCL1	YNL289W	SDH5	Q08230	162 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	YPQ1	Q12010	308 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	EMP46	Q12396	444 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	RRD2	Q12461	358 aa		4.75	□□□□□ -1.65
PCL1	YNL289W	PEX34	P25584	144 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	MRP4	P32902	394 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	JNM1	P36224	373 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	SHE3	P38272	425 aa	Known RBP	4.74	□□□□□ -1.65
PCL1	YNL289W	FHL1	P39521	936 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	MMF1	P40185	145 aa	Known RBP	4.74	□□□□□ -1.65
PCL1	YNL289W	SHQ1	P40486	507 aa	Predicted RBP	4.74	□□□□□ -1.65
PCL1	YNL289W	GUF1	P46943	645 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	ARP10	Q04549	284 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	YDR222W	Q04925	415 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	NEW1	Q08972	1196 aa	Known RBP	4.74	□□□□□ -1.65
PCL1	YNL289W	ATG9	Q12142	997 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	NBP2	Q12163	236 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	FMP27	Q06179	2628 aa		4.74	□□□□□ -1.65
PCL1	YNL289W	YKL050C	P35736	922 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	AVT2	P39981	480 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	YER189W	P40104	122 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	MND1	P53102	219 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	YNL181W	P53878	407 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	ATG16	Q03818	150 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	GRS2	Q06817	618 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	SIL1	Q08199	421 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	NRT1	Q08485	598 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	YOR387C	Q08910	206 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	TAF10	Q12030	206 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	BI3	Q9ZZW7	517 aa		4.73	□□□□□ -1.65
PCL1	YNL289W	RPS3	P05750	240 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	PPH22	P23595	377 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	PUP3	P25451	205 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	MGR1	P25573	417 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	MRS6	P32864	603 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	CNS1	P33313	385 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	MPE1	P35728	441 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	NOP4	P37838	685 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	PCH2	P38126	564 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	RIC1	P40395	1056 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	SEC24	P40482	926 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	INA17	Q02888	182 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	ELP3	Q02908	557 aa	Known RBP	4.72	□□□□□ -1.65
PCL1	YNL289W	PIR3	Q03180	325 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	EKI1	Q03764	534 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	FMP42	Q04991	504 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	YLR281C	Q05863	155 aa		4.72	□□□□□ -1.65
PCL1	YNL289W	YLR302C	O13544	120 aa		4.71	□□□□□ -1.66
PCL1	YNL289W	JIP3	O13555	125 aa		4.71	□□□□□ -1.66
PCL1	YNL289W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
PCL1	YNL289W	RPB2	P08518	1224 aa	Known RBP	4.71	□□□□□ -1.66
PCL1	YNL289W	GUK1	P15454	187 aa	Known RBP	4.71	□□□□□ -1.66
PCL1	YNL289W	EST1	P17214	699 aa	Predicted RBP	4.71	□□□□□ -1.66
PCL1	YNL289W	RAD57	P25301	460 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms