RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	COS12	P53053	380 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	LCL3	P53153	274 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	JJJ1	P53863	590 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	TRS31	Q03337	283 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	YDR018C	Q12185	396 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	RMD5	Q12508	421 aa		5.54	□□□□□ -1.52
CSL4	YNL232W	PHO5	P00635	467 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	LAT1	P12695	482 aa	Known RBP	5.53	□□□□□ -1.52
CSL4	YNL232W	PMS1	P14242	873 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	SPO12	P17123	173 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	NDI1	P32340	513 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	RPN12	P32496	274 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	RPD3	P32561	433 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	NFU1	P32860	256 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	SOL2	P37262	315 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	YHR020W	P38708	688 aa	Known RBP	5.53	□□□□□ -1.52
CSL4	YNL232W	MNL1	P38888	796 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	SEO1	P39709	593 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	SAP1	P39955	897 aa	Known RBP	5.53	□□□□□ -1.52
CSL4	YNL232W	UTP18	P40362	594 aa	Predicted RBP	5.53	□□□□□ -1.52
CSL4	YNL232W	YIL152W	P40455	235 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	BRO1	P48582	844 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	NOP15	P53927	220 aa	Predicted RBP	5.53	□□□□□ -1.52
CSL4	YNL232W	YOR114W	Q12219	294 aa		5.53	□□□□□ -1.52
CSL4	YNL232W	PRP16	P15938	1071 aa	Predicted RBP	5.52	□□□□□ -1.53
CSL4	YNL232W	ATO2	P32907	282 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	SKT5	P34226	696 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	MTH1	P35198	433 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	MAK5	P38112	773 aa	Predicted RBP	5.52	□□□□□ -1.53
CSL4	YNL232W	YSW1	P38280	609 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	RTT107	P38850	1070 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	SET5	P38890	526 aa	Known RBP	5.52	□□□□□ -1.53
CSL4	YNL232W	CKB2	P38930	258 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	SPC72	P39723	622 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	CUP9	P41817	306 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	BNA3	P47039	444 aa	Known RBP	5.52	□□□□□ -1.53
CSL4	YNL232W	TIM44	Q01852	431 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	RPN9	Q04062	393 aa	Known RBP	5.52	□□□□□ -1.53
CSL4	YNL232W	SHE9	Q04172	456 aa		5.52	□□□□□ -1.53
CSL4	YNL232W	HSC82	P15108	705 aa	Known RBP	5.51	□□□□□ -1.53
CSL4	YNL232W	CHA1	P25379	360 aa	Known RBP	5.51	□□□□□ -1.53
CSL4	YNL232W	MXR2	P25566	168 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	SRB5	P32585	307 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	TIP20	P33891	701 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	RPS27A	P35997	82 aa	Known RBP	5.51	□□□□□ -1.53
CSL4	YNL232W	YPT52	P36018	234 aa	Known RBP	5.51	□□□□□ -1.53
CSL4	YNL232W	RPS27B	P38711	82 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	YEL057C	P39983	233 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	BAP3	P41815	604 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	YML6	P51998	286 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	LGE1	Q02796	332 aa	Known RBP	5.51	□□□□□ -1.53
CSL4	YNL232W	VPS16	Q03308	798 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	YDR209C	Q03480	137 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	YPR022C	Q12139	1133 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	YGR161W-C	Q3E744	92 aa		5.51	□□□□□ -1.53
CSL4	YNL232W	PHO2	P07269	559 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	ERG11	P10614	530 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	MET8	P15807	274 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	CLN2	P20438	545 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	GID7	P25569	745 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	YCR099C	P25657	155 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	PMT2	P31382	759 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	CNS1	P33313	385 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	LHS1	P36016	881 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	PCH2	P38126	564 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	MRP21	P38175	177 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	YHR127W	P38833	243 aa	Known RBP	5.5	□□□□□ -1.53
CSL4	YNL232W	YEL020C	P39994	560 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	SDP1	P40479	209 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	PMT4	P46971	762 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	PET117	Q02771	107 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	YDR541C	Q03049	344 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	OPY2	Q06810	360 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	SLD7	Q08457	257 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	FAP7	Q12055	197 aa	Predicted RBP	5.5	□□□□□ -1.53
CSL4	YNL232W	LSP1	Q12230	341 aa	Known RBP	5.5	□□□□□ -1.53
CSL4	YNL232W	HER1	Q12276	1246 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	BLM10	P43583	2143 aa		5.5	□□□□□ -1.53
CSL4	YNL232W	QCR6	P00127	147 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	ERR1	P0CX10	437 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	ERR2	P0CX11	437 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	YAR066W	P0CX18	203 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	YHR214W	P0CX19	203 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	PHO13	P19881	312 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	PHO3	P24031	467 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	BUD14	P27637	709 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	YJU2	P28320	278 aa	Predicted RBP	5.49	□□□□□ -1.53
CSL4	YNL232W	AAR2	P32357	355 aa	Predicted RBP	5.49	□□□□□ -1.53
CSL4	YNL232W	KRE6	P32486	720 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	VRG4	P40107	337 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	PXA1	P41909	870 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	ERR3	P42222	437 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	PEX8	P53248	589 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	HOL1	P53389	586 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	BSC5	P53755	489 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	INN1	P53901	409 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	SSL2	Q00578	843 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	TFB2	Q02939	513 aa		5.49	□□□□□ -1.53
CSL4	YNL232W	NOP6	Q07623	225 aa	Known RBP	5.49	□□□□□ -1.53
CSL4	YNL232W	ENT4	Q07872	247 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms