RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SPT15P13393 240 aaKnown RBP5.72□□□□□ -1.49
ATG4YNL223W YAP1P19880 650 aaKnown RBP5.72□□□□□ -1.49
ATG4YNL223W CLB4P24871 460 aa5.72□□□□□ -1.49
ATG4YNL223W TRX3P25372 127 aa5.72□□□□□ -1.49
ATG4YNL223W SPB1P25582 841 aaPredicted RBP5.72□□□□□ -1.49
ATG4YNL223W RML2P32611 393 aa5.72□□□□□ -1.49
ATG4YNL223W AXL2P38928 823 aa5.72□□□□□ -1.49
ATG4YNL223W ERV46P39727 415 aa5.72□□□□□ -1.49
ATG4YNL223W CAB2P40506 365 aa5.72□□□□□ -1.49
ATG4YNL223W VHR1P40522 640 aa5.72□□□□□ -1.49
ATG4YNL223W SNL1P40548 159 aa5.72□□□□□ -1.49
ATG4YNL223W AGP3P43548 558 aa5.72□□□□□ -1.49
ATG4YNL223W ARI1P53111 347 aaKnown RBP5.72□□□□□ -1.49
ATG4YNL223W YNL095CP53932 642 aa5.72□□□□□ -1.49
ATG4YNL223W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
ATG4YNL223W YPL113CQ02961 396 aa5.72□□□□□ -1.49
ATG4YNL223W UGO1Q03327 502 aa5.72□□□□□ -1.49
ATG4YNL223W EAF1Q06337 982 aa5.72□□□□□ -1.49
ATG4YNL223W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
ATG4YNL223W NMD4Q12129 218 aa5.72□□□□□ -1.49
ATG4YNL223W YLL054CQ12244 843 aa5.72□□□□□ -1.49
ATG4YNL223W RPN5Q12250 445 aaKnown RBP5.72□□□□□ -1.49
ATG4YNL223W PSY3Q12318 242 aa5.72□□□□□ -1.49
ATG4YNL223W SUL2Q12325 893 aa5.72□□□□□ -1.49
ATG4YNL223W SNF8Q12483 233 aa5.72□□□□□ -1.49
ATG4YNL223W BRR1Q99177 341 aaPredicted RBP5.72□□□□□ -1.49
ATG4YNL223W ATP4P05626 244 aa5.71□□□□□ -1.49
ATG4YNL223W SUI3P09064 285 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W RPS21AP0C0V8 87 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W SNF4P12904 322 aa5.71□□□□□ -1.49
ATG4YNL223W DAP2P18962 818 aa5.71□□□□□ -1.49
ATG4YNL223W SLM5P25345 492 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W SPT16P32558 1035 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W TFB1P32776 642 aa5.71□□□□□ -1.49
ATG4YNL223W SPO23P33757 523 aa5.71□□□□□ -1.49
ATG4YNL223W CBP4P37267 147 aa5.71□□□□□ -1.49
ATG4YNL223W DED81P38707 554 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W YJL070CP40361 888 aa5.71□□□□□ -1.49
ATG4YNL223W AZF1P41696 914 aa5.71□□□□□ -1.49
ATG4YNL223W TY4A-JP47023 414 aa5.71□□□□□ -1.49
ATG4YNL223W COQ5P49017 307 aa5.71□□□□□ -1.49
ATG4YNL223W MRK1P50873 501 aa5.71□□□□□ -1.49
ATG4YNL223W RMR1P53060 241 aa5.71□□□□□ -1.49
ATG4YNL223W SGF73P53165 657 aa5.71□□□□□ -1.49
ATG4YNL223W DSL1P53847 754 aa5.71□□□□□ -1.49
ATG4YNL223W CTK1Q03957 528 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W VPS74Q06385 345 aa5.71□□□□□ -1.49
ATG4YNL223W GPI11Q06636 219 aa5.71□□□□□ -1.49
ATG4YNL223W YLL007CQ07799 665 aa5.71□□□□□ -1.49
ATG4YNL223W GYP1Q08484 637 aa5.71□□□□□ -1.49
ATG4YNL223W YOR342CQ12182 319 aa5.71□□□□□ -1.49
ATG4YNL223W MEX67Q99257 599 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W HRP1Q99383 534 aaKnown RBP5.71□□□□□ -1.49
ATG4YNL223W Q0010Q9ZZX9 128 aa5.71□□□□□ -1.49
ATG4YNL223W TY4B-PA0A0B7P3V8 1104 aa5.71□□□□□ -1.5
ATG4YNL223W YPR096CO13587 100 aa5.71□□□□□ -1.5
ATG4YNL223W CBP2P03874 630 aaPredicted RBP5.71□□□□□ -1.5
ATG4YNL223W UNG1P12887 359 aa5.71□□□□□ -1.5
ATG4YNL223W CMK2P22517 447 aa5.71□□□□□ -1.5
ATG4YNL223W CDC5P32562 705 aa5.71□□□□□ -1.5
ATG4YNL223W SEC17P32602 292 aa5.71□□□□□ -1.5
ATG4YNL223W KKQ8P36004 724 aa5.71□□□□□ -1.5
ATG4YNL223W VPS21P36017 210 aaKnown RBP5.71□□□□□ -1.5
ATG4YNL223W GLG1P36143 616 aa5.71□□□□□ -1.5
ATG4YNL223W MRPL37P36532 105 aa5.71□□□□□ -1.5
ATG4YNL223W RRP3P38712 501 aaKnown RBP5.71□□□□□ -1.5
ATG4YNL223W VMA10P48836 114 aaKnown RBP5.71□□□□□ -1.5
ATG4YNL223W MUP1P50276 574 aa5.71□□□□□ -1.5
ATG4YNL223W KXD1P53158 218 aa5.71□□□□□ -1.5
ATG4YNL223W BIO5P53744 561 aaKnown RBP5.71□□□□□ -1.5
ATG4YNL223W SPR6Q01684 191 aa5.71□□□□□ -1.5
ATG4YNL223W MUS81Q04149 632 aaPredicted RBP5.71□□□□□ -1.5
ATG4YNL223W PEX12Q04370 399 aa5.71□□□□□ -1.5
ATG4YNL223W YKU80Q04437 629 aa5.71□□□□□ -1.5
ATG4YNL223W SSQ1Q05931 657 aaPredicted RBP5.71□□□□□ -1.5
ATG4YNL223W MFG1Q07684 458 aa5.71□□□□□ -1.5
ATG4YNL223W PFA4Q12006 378 aa5.71□□□□□ -1.5
ATG4YNL223W HAL9Q12180 1030 aa5.71□□□□□ -1.5
ATG4YNL223W PFK27Q12471 397 aaPredicted RBP5.71□□□□□ -1.5
ATG4YNL223W STT4P37297 1900 aa5.7□□□□□ -1.5
ATG4YNL223W MSB2P32334 1306 aa5.7□□□□□ -1.5
ATG4YNL223W RAD7P06779 565 aa5.7□□□□□ -1.5
ATG4YNL223W TY2A-LR1P0C2J4 438 aa5.7□□□□□ -1.5
ATG4YNL223W TY2A-FP0CX61 438 aa5.7□□□□□ -1.5
ATG4YNL223W TY2A-GR2P0CX62 438 aa5.7□□□□□ -1.5
ATG4YNL223W ATR1P13090 542 aa5.7□□□□□ -1.5
ATG4YNL223W SCL1P21243 252 aaKnown RBP5.7□□□□□ -1.5
ATG4YNL223W TY2A-CP25383 438 aa5.7□□□□□ -1.5
ATG4YNL223W DMC1P25453 334 aa5.7□□□□□ -1.5
ATG4YNL223W SYP1P25623 870 aaKnown RBP5.7□□□□□ -1.5
ATG4YNL223W PEX3P28795 441 aa5.7□□□□□ -1.5
ATG4YNL223W CAT2P32796 670 aaKnown RBP5.7□□□□□ -1.5
ATG4YNL223W MDJ1P35191 511 aa5.7□□□□□ -1.5
ATG4YNL223W RBG1P39729 369 aa5.7□□□□□ -1.5
ATG4YNL223W RSP5P39940 809 aaKnown RBP5.7□□□□□ -1.5
ATG4YNL223W BIO3P50277 480 aa5.7□□□□□ -1.5
ATG4YNL223W YNR068CP53754 272 aa5.7□□□□□ -1.5
ATG4YNL223W CWC24P53769 259 aa5.7□□□□□ -1.5
ATG4YNL223W GOR1P53839 350 aa5.7□□□□□ -1.5
ATG4YNL223W TY2A-DR2Q03483 438 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms