RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	VEL1	P53058	206 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	OKP1	P53298	406 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	YPR114W	Q06107	315 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	NUT2	Q06213	157 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	DXO1	Q06349	442 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	THP3	Q12049	470 aa	Known RBP	4.54	□□□□□ -1.68
SSB2	YNL209W	NTO1	Q12311	748 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	PSY3	Q12318	242 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	AHA1	Q12449	350 aa	Known RBP	4.54	□□□□□ -1.68
SSB2	YNL209W	YKL018C-A	Q3E7A7	99 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	MPD2	Q99316	277 aa		4.54	□□□□□ -1.68
SSB2	YNL209W	MSS18	P08593	268 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	UGA1	P17649	471 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YCR016W	P25617	290 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	HSP30	P25619	332 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ATP7	P30902	174 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ISF1	P32488	338 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	THI80	P35202	319 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ROT2	P38138	954 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	COS111	P38308	924 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YHR045W	P38775	560 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	PCL5	P38794	229 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	LSM12	P38828	187 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	DUN1	P39009	513 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	FAA2	P39518	744 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	RCY1	P39531	840 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	MMF1	P40185	145 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	JLP2	P40206	208 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	TOK1	P40310	691 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	RRD1	P40454	393 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	PKP1	P40530	394 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	GAT1	P43574	510 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YGL176C	P46945	554 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	AIM23	P47015	356 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	MPS3	P47069	682 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	TOM22	P49334	152 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	MNT2	P53059	558 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	SHY1	P53266	389 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ECM9	Q02202	377 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YMR010W	Q03687	405 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	SEG1	Q04279	960 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YHC1	Q05900	231 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	DTD1	Q07648	150 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	HBT1	Q07653	1046 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	NTG2	Q08214	380 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	SCM3	Q12334	223 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	PST1	Q12355	444 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	THP2	O13539	261 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	SEM1	O94742	89 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	HXK2	P04807	486 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	BCY1	P07278	416 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	MSF1	P08425	469 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ATR1	P13090	542 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	MSS116	P15424	664 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	SIR1	P21691	654 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	UBA1	P22515	1024 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	PHO91	P27514	894 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	DOA4	P32571	926 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	COX13	P32799	129 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	LIP5	P32875	414 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	CAF4	P36130	643 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	STP2	P38704	541 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	EXO1	P39875	702 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	RPL34B	P40525	121 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	IME4	P41833	600 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	LOC1	P43586	204 aa	Predicted RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	PET130	P47065	347 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	RMR1	P53060	241 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	YGL108C	P53139	140 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	SPC105	P53148	917 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	HST3	P53687	447 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	ORC3	P54790	616 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	TOF2	Q02208	771 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	EGD1	Q02642	157 aa	Known RBP	4.53	□□□□□ -1.68
SSB2	YNL209W	VTA1	Q06263	330 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	RSB1	Q08417	382 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	IES3	Q12345	250 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	JLP1	Q12358	412 aa		4.53	□□□□□ -1.68
SSB2	YNL209W	TIM9	O74700	87 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	SPT3	P06844	337 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	RAP1	P11938	827 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	MSB1	P21339	1137 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	RPS1A	P33442	255 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	MAC1	P35192	417 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	VPS21	P36017	210 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	STB6	P36085	766 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	SKG1	P36169	355 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	CCZ1	P38273	704 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	ARF3	P40994	183 aa	RIP-Chip data	4.52	□□□□□ -1.69	not detected
SSB2	YNL209W	ERG10	P41338	398 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	YJR124C	P47159	448 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	GTO1	P48239	356 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	UPF3	P48412	387 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	ARE2	P53629	642 aa	Known RBP	4.52	□□□□□ -1.69
SSB2	YNL209W	MET31	Q03081	177 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	PIB1	Q06651	286 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	RAD34	Q06665	692 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	RSA1	Q08932	381 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	ATG29	Q12092	213 aa		4.52	□□□□□ -1.69
SSB2	YNL209W	PER33	Q12144	273 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms