RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W SSO2P39926 295 aa6.88□□□□□ -1.31
HDA1YNL021W GCD14P46959 383 aaPredicted RBP6.88□□□□□ -1.31
HDA1YNL021W DIA3P52290 468 aa6.88□□□□□ -1.31
HDA1YNL021W UBC11P52492 156 aa6.88□□□□□ -1.31
HDA1YNL021W RRP45Q05636 305 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W GSC2P40989 1895 aa6.87□□□□□ -1.31
HDA1YNL021W FLO11P08640 1367 aa6.87□□□□□ -1.31
HDA1YNL021W AI1P03875 834 aa6.87□□□□□ -1.31
HDA1YNL021W PRP6P19735 899 aaPredicted RBP6.87□□□□□ -1.31
HDA1YNL021W IMG1P25626 169 aa6.87□□□□□ -1.31
HDA1YNL021W PHO11P35842 467 aa6.87□□□□□ -1.31
HDA1YNL021W PHO12P38693 467 aa6.87□□□□□ -1.31
HDA1YNL021W KEL1P38853 1164 aaKnown RBP6.87□□□□□ -1.31
HDA1YNL021W UIP3P39547 235 aa6.87□□□□□ -1.31
HDA1YNL021W ECM10P39987 644 aa6.87□□□□□ -1.31
HDA1YNL021W YFL066CP43538 392 aa6.87□□□□□ -1.31
HDA1YNL021W YFR020WP43600 232 aa6.87□□□□□ -1.31
HDA1YNL021W DPB11P47027 764 aaPredicted RBP6.87□□□□□ -1.31
HDA1YNL021W YNL144CP53907 740 aa6.87□□□□□ -1.31
HDA1YNL021W NDL1Q06568 189 aa6.87□□□□□ -1.31
HDA1YNL021W YPL216WQ08964 1102 aa6.87□□□□□ -1.31
HDA1YNL021W INP53Q12271 1107 aa6.87□□□□□ -1.31
HDA1YNL021W COX3P00420 269 aa6.86□□□□□ -1.31
HDA1YNL021W AAC1P04710 309 aa6.86□□□□□ -1.31
HDA1YNL021W ARG81P05085 880 aa6.86□□□□□ -1.31
HDA1YNL021W RPL22AP05749 121 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W SIR3P06701 978 aa6.86□□□□□ -1.31
HDA1YNL021W SAG1P20840 650 aa6.86□□□□□ -1.31
HDA1YNL021W VPS1P21576 704 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W NDI1P32340 513 aa6.86□□□□□ -1.31
HDA1YNL021W DED81P38707 554 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W YER130CP39959 443 aa6.86□□□□□ -1.31
HDA1YNL021W YER034WP40022 185 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W SMA1Q02651 245 aa6.86□□□□□ -1.31
HDA1YNL021W ATG38Q05789 226 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W RPL31BP0C2H9 113 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W YPK1P12688 680 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W GCD2P12754 651 aaPredicted RBP6.86□□□□□ -1.31
HDA1YNL021W IAH1P41734 238 aa6.86□□□□□ -1.31
HDA1YNL021W AIM22P47051 409 aa6.86□□□□□ -1.31
HDA1YNL021W MUP1P50276 574 aa6.86□□□□□ -1.31
HDA1YNL021W RMD9P53140 646 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W MPS2P53159 387 aa6.86□□□□□ -1.31
HDA1YNL021W PNC1P53184 216 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W CAF130P53280 1122 aaPredicted RBP6.86□□□□□ -1.31
HDA1YNL021W COQ6P53318 479 aa6.86□□□□□ -1.31
HDA1YNL021W COP1P53622 1201 aaKnown RBP6.86□□□□□ -1.31
HDA1YNL021W BUD17P53727 317 aa6.86□□□□□ -1.31
HDA1YNL021W YMR130WQ04223 302 aa6.86□□□□□ -1.31
HDA1YNL021W TRM13Q12383 476 aa6.86□□□□□ -1.31
HDA1YNL021W RRD2Q12461 358 aa6.86□□□□□ -1.31
HDA1YNL021W TDH1P00360 332 aaKnown RBP6.85□□□□□ -1.31
HDA1YNL021W RPP2AP05319 106 aaKnown RBP6.85□□□□□ -1.31
HDA1YNL021W UNG1P12887 359 aa6.85□□□□□ -1.31
HDA1YNL021W TPO5P36029 618 aa6.85□□□□□ -1.31
HDA1YNL021W MRPL10P36520 322 aa6.85□□□□□ -1.31
HDA1YNL021W CCL1P37366 393 aa6.85□□□□□ -1.31
HDA1YNL021W PEX32P38292 413 aa6.85□□□□□ -1.31
HDA1YNL021W PLB1P39105 664 aa6.85□□□□□ -1.31
HDA1YNL021W ASG1P40467 964 aa6.85□□□□□ -1.31
HDA1YNL021W YFR018CP43599 363 aa6.85□□□□□ -1.31
HDA1YNL021W OCA2P53949 197 aa6.85□□□□□ -1.31
HDA1YNL021W SLG1P54867 378 aa6.85□□□□□ -1.31
HDA1YNL021W YDR109CQ04585 715 aa6.85□□□□□ -1.31
HDA1YNL021W DSE3Q08729 430 aa6.85□□□□□ -1.31
HDA1YNL021W TIP41Q12199 356 aa6.85□□□□□ -1.31
HDA1YNL021W LCB4Q12246 624 aa6.85□□□□□ -1.31
HDA1YNL021W YLR122CQ12312 125 aa6.85□□□□□ -1.31
HDA1YNL021W SPS22P25380 463 aa6.85□□□□□ -1.31
HDA1YNL021W FUB1P25659 250 aa6.85□□□□□ -1.31
HDA1YNL021W BMH1P29311 267 aaKnown RBP6.85□□□□□ -1.31
HDA1YNL021W YBL028CP38202 106 aa6.85□□□□□ -1.31
HDA1YNL021W MCX1P38323 520 aaPredicted RBP6.85□□□□□ -1.31
HDA1YNL021W CIN1P40987 1014 aa6.85□□□□□ -1.31
HDA1YNL021W FAR3P46671 204 aa6.85□□□□□ -1.31
HDA1YNL021W RPA34P47006 233 aaPredicted RBP6.85□□□□□ -1.31
HDA1YNL021W URB2P47108 1174 aa6.85□□□□□ -1.31
HDA1YNL021W AMA1P50082 593 aa6.85□□□□□ -1.31
HDA1YNL021W RTC4P53850 401 aa6.85□□□□□ -1.31
HDA1YNL021W CAR1P00812 333 aaKnown RBP6.84□□□□□ -1.31
HDA1YNL021W ILV5P06168 395 aaKnown RBP6.84□□□□□ -1.31
HDA1YNL021W PRP2P20095 876 aaPredicted RBP6.84□□□□□ -1.31
HDA1YNL021W GSY2P27472 705 aa6.84□□□□□ -1.31
HDA1YNL021W MCM4P30665 933 aaKnown RBP6.84□□□□□ -1.31
HDA1YNL021W NTG1P31378 399 aa6.84□□□□□ -1.31
HDA1YNL021W HIR2P32480 875 aa6.84□□□□□ -1.31
HDA1YNL021W PCA1P38360 1216 aa6.84□□□□□ -1.31
HDA1YNL021W TRM44Q02648 567 aaKnown RBP6.84□□□□□ -1.31
HDA1YNL021W TDA6Q06466 467 aa6.84□□□□□ -1.31
HDA1YNL021W IRC13Q08630 104 aa6.84□□□□□ -1.31
HDA1YNL021W YDR215CQ12240 137 aa6.84□□□□□ -1.31
HDA1YNL021W YOR012WQ12351 137 aa6.84□□□□□ -1.31
HDA1YNL021W MYO1P08964 1928 aa6.84□□□□□ -1.31
HDA1YNL021W STE4P18851 423 aa6.83□□□□□ -1.32
HDA1YNL021W RPB4P20433 221 aaPredicted RBP6.83□□□□□ -1.32
HDA1YNL021W HMX1P32339 317 aa6.83□□□□□ -1.32
HDA1YNL021W GSH1P32477 678 aa6.83□□□□□ -1.32
HDA1YNL021W BUL1P48524 976 aa6.83□□□□□ -1.32
HDA1YNL021W YIP4P53093 235 aa6.83□□□□□ -1.32
HDA1YNL021W YIP5P53108 310 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms