RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W ASG1P40467 964 aa3.88□□□□□ -1.79
PUB1YNL016W YIL077CP40508 320 aa3.88□□□□□ -1.79
PUB1YNL016W YFR018CP43599 363 aa3.88□□□□□ -1.79
PUB1YNL016W URB2P47108 1174 aa3.88□□□□□ -1.79
PUB1YNL016W COS5P47187 383 aa3.88□□□□□ -1.79
PUB1YNL016W RFX1P48743 811 aa3.88□□□□□ -1.79
PUB1YNL016W YGL138CP53122 345 aa3.88□□□□□ -1.79
PUB1YNL016W YGR054WP53235 642 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W PRM1P53835 661 aa3.88□□□□□ -1.79
PUB1YNL016W EFM6P53970 246 aa3.88□□□□□ -1.79
PUB1YNL016W RRP45Q05636 305 aaKnown RBP3.88□□□□□ -1.79
PUB1YNL016W COS7Q07788 383 aa3.88□□□□□ -1.79
PUB1YNL016W DIA2Q08496 732 aaPredicted RBP3.88□□□□□ -1.79
PUB1YNL016W MED2Q12124 431 aa3.88□□□□□ -1.79
PUB1YNL016W TAF3Q12297 353 aa3.88□□□□□ -1.79
PUB1YNL016W LDB17Q12342 491 aa3.88□□□□□ -1.79
PUB1YNL016W SWM1Q12379 170 aa3.88□□□□□ -1.79
PUB1YNL016W YDL007C-AQ2V2Q0 85 aa3.88□□□□□ -1.79
PUB1YNL016W DFG16Q99234 619 aa3.88□□□□□ -1.79
PUB1YNL016W JIP3O13555 125 aa3.87□□□□□ -1.79
PUB1YNL016W MRP13P12686 339 aa3.87□□□□□ -1.79
PUB1YNL016W URA4P20051 364 aa3.87□□□□□ -1.79
PUB1YNL016W SEC15P22224 910 aa3.87□□□□□ -1.79
PUB1YNL016W VPS3P23643 1011 aa3.87□□□□□ -1.79
PUB1YNL016W ADH7P25377 361 aa3.87□□□□□ -1.79
PUB1YNL016W EMC1P25574 760 aa3.87□□□□□ -1.79
PUB1YNL016W FEN2P25621 512 aaKnown RBP3.87□□□□□ -1.79
PUB1YNL016W RFA2P26754 273 aaKnown RBP3.87□□□□□ -1.79
PUB1YNL016W ASF2P32448 525 aaPredicted RBP3.87□□□□□ -1.79
PUB1YNL016W COT1P32798 439 aa3.87□□□□□ -1.79
PUB1YNL016W YPT53P36019 220 aa3.87□□□□□ -1.79
PUB1YNL016W TVP38P36164 337 aa3.87□□□□□ -1.79
PUB1YNL016W RFS1P38234 210 aaKnown RBP3.87□□□□□ -1.79
PUB1YNL016W DIA4P38705 446 aaPredicted RBP3.87□□□□□ -1.79
PUB1YNL016W BZZ1P38822 633 aa3.87□□□□□ -1.79
PUB1YNL016W HMF1P40037 129 aaKnown RBP3.87□□□□□ -1.79
PUB1YNL016W TMN3P40071 706 aa3.87□□□□□ -1.79
PUB1YNL016W CSM2P40465 213 aa3.87□□□□□ -1.79
PUB1YNL016W SWP82P43554 623 aa3.87□□□□□ -1.79
PUB1YNL016W STB2P46679 850 aa3.87□□□□□ -1.79
PUB1YNL016W MSE1P48525 536 aa3.87□□□□□ -1.79
PUB1YNL016W HOP2P53187 214 aa3.87□□□□□ -1.79
PUB1YNL016W FHN1P53279 174 aa3.87□□□□□ -1.79
PUB1YNL016W MNT4P53745 580 aa3.87□□□□□ -1.79
PUB1YNL016W GIM3P53900 129 aa3.87□□□□□ -1.79
PUB1YNL016W YAT1P80235 687 aa3.87□□□□□ -1.79
PUB1YNL016W MUK1Q02866 612 aa3.87□□□□□ -1.79
PUB1YNL016W RSM28Q03430 361 aa3.87□□□□□ -1.79
PUB1YNL016W INP2Q03824 705 aa3.87□□□□□ -1.79
PUB1YNL016W YDR179W-AQ03983 463 aa3.87□□□□□ -1.79
PUB1YNL016W MYO5Q04439 1219 aaKnown RBP3.87□□□□□ -1.79
PUB1YNL016W YLR297WQ05899 129 aa3.87□□□□□ -1.79
PUB1YNL016W NDL1Q06568 189 aa3.87□□□□□ -1.79
PUB1YNL016W ARR1Q06596 294 aa3.87□□□□□ -1.79
PUB1YNL016W MDM36Q06820 579 aa3.87□□□□□ -1.79
PUB1YNL016W AEP3Q12089 606 aa3.87□□□□□ -1.79
PUB1YNL016W RBD2Q12270 262 aa3.87□□□□□ -1.79
PUB1YNL016W YRM1Q12340 786 aa3.87□□□□□ -1.79
PUB1YNL016W MRPL23Q12487 163 aaPredicted RBP3.87□□□□□ -1.79
PUB1YNL016W YLR422WQ06409 1932 aa3.86□□□□□ -1.79
PUB1YNL016W STE3P06783 470 aa3.86□□□□□ -1.79
PUB1YNL016W UNG1P12887 359 aa3.86□□□□□ -1.79
PUB1YNL016W MAK31P23059 88 aa3.86□□□□□ -1.79
PUB1YNL016W PPH22P23595 377 aa3.86□□□□□ -1.79
PUB1YNL016W YSP3P25036 478 aa3.86□□□□□ -1.79
PUB1YNL016W PUP3P25451 205 aaKnown RBP3.86□□□□□ -1.79
PUB1YNL016W RME1P32338 300 aaKnown RBP3.86□□□□□ -1.79
PUB1YNL016W MSN4P33749 630 aa3.86□□□□□ -1.79
PUB1YNL016W YKL097CP34245 136 aa3.86□□□□□ -1.79
PUB1YNL016W RRP1P35178 278 aaPredicted RBP3.86□□□□□ -1.79
PUB1YNL016W SDH8P38345 138 aa3.86□□□□□ -1.79
PUB1YNL016W MSG5P38590 489 aa3.86□□□□□ -1.79
PUB1YNL016W ARP1P38696 384 aa3.86□□□□□ -1.79
PUB1YNL016W YJL070CP40361 888 aa3.86□□□□□ -1.79
PUB1YNL016W VHS2P40463 436 aa3.86□□□□□ -1.79
PUB1YNL016W MOB1P40484 314 aa3.86□□□□□ -1.79
PUB1YNL016W MMM1P41800 426 aa3.86□□□□□ -1.79
PUB1YNL016W YJL107CP42947 387 aa3.86□□□□□ -1.79
PUB1YNL016W GCD14P46959 383 aaPredicted RBP3.86□□□□□ -1.79
PUB1YNL016W YGR079WP53249 370 aa3.86□□□□□ -1.79
PUB1YNL016W SLU7Q02775 382 aaKnown RBP3.86□□□□□ -1.79
PUB1YNL016W NRG1Q03125 231 aa3.86□□□□□ -1.79
PUB1YNL016W ATC1Q04005 294 aa3.86□□□□□ -1.79
PUB1YNL016W HCR1Q05775 265 aaKnown RBP3.86□□□□□ -1.79
PUB1YNL016W STE23Q06010 1027 aa3.86□□□□□ -1.79
PUB1YNL016W CRN1Q06440 651 aa3.86□□□□□ -1.79
PUB1YNL016W TPO1Q07824 586 aa3.86□□□□□ -1.79
PUB1YNL016W SIL1Q08199 421 aa3.86□□□□□ -1.79
PUB1YNL016W BAG7Q12128 409 aa3.86□□□□□ -1.79
PUB1YNL016W NTO1Q12311 748 aa3.86□□□□□ -1.79
PUB1YNL016W RPP2AP05319 106 aaKnown RBP3.85□□□□□ -1.79
PUB1YNL016W PRP2P20095 876 aaPredicted RBP3.85□□□□□ -1.79
PUB1YNL016W YIM1P28625 365 aa3.85□□□□□ -1.79
PUB1YNL016W MSS1P32559 526 aaPredicted RBP3.85□□□□□ -1.79
PUB1YNL016W YBR144CP34215 104 aa3.85□□□□□ -1.79
PUB1YNL016W YKL070WP36087 169 aa3.85□□□□□ -1.79
PUB1YNL016W NTR2P36118 322 aaPredicted RBP3.85□□□□□ -1.79
PUB1YNL016W AAP1P37898 856 aaKnown RBP3.85□□□□□ -1.79
PUB1YNL016W YBR139WP38109 508 aa3.85□□□□□ -1.79
PUB1YNL016W ZTA1P38230 334 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms