RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W RRN3P36070 627 aa6.96□□□□□ -1.3
PRE5YMR314W IFA38P38286 347 aa6.96□□□□□ -1.3
PRE5YMR314W GIP2P40036 548 aa6.96□□□□□ -1.3
PRE5YMR314W SEC9P40357 651 aa6.96□□□□□ -1.3
PRE5YMR314W MDV1P47025 714 aa6.96□□□□□ -1.3
PRE5YMR314W SHY1P53266 389 aa6.96□□□□□ -1.3
PRE5YMR314W BUD32P53323 261 aa6.96□□□□□ -1.3
PRE5YMR314W CWC22P53333 577 aaKnown RBP6.96□□□□□ -1.3
PRE5YMR314W MOT3P54785 490 aaKnown RBP6.96□□□□□ -1.3
PRE5YMR314W RPL22BP56628 122 aaKnown RBP6.96□□□□□ -1.3
PRE5YMR314W UTP6Q02354 440 aaKnown RBP6.96□□□□□ -1.3
PRE5YMR314W NUP116Q02630 1113 aa6.96□□□□□ -1.3
PRE5YMR314W GAS3Q03655 524 aa6.96□□□□□ -1.3
PRE5YMR314W MUS81Q04149 632 aaPredicted RBP6.96□□□□□ -1.3
PRE5YMR314W GLO2Q05584 274 aa6.96□□□□□ -1.3
PRE5YMR314W ECI1Q05871 280 aa6.96□□□□□ -1.3
PRE5YMR314W CRN1Q06440 651 aa6.96□□□□□ -1.3
PRE5YMR314W DYN1P36022 4092 aa6.96□□□□□ -1.3
PRE5YMR314W PBS2P08018 668 aa6.95□□□□□ -1.3
PRE5YMR314W HMG1P12683 1054 aa6.95□□□□□ -1.3
PRE5YMR314W VPS33P20795 691 aa6.95□□□□□ -1.3
PRE5YMR314W STO1P34160 861 aaKnown RBP6.95□□□□□ -1.3
PRE5YMR314W APE4P38821 490 aa6.95□□□□□ -1.3
PRE5YMR314W STE24P47154 453 aa6.95□□□□□ -1.3
PRE5YMR314W HST2P53686 357 aa6.95□□□□□ -1.3
PRE5YMR314W LSM3P57743 89 aaKnown RBP6.95□□□□□ -1.3
PRE5YMR314W SDH1Q00711 640 aa6.95□□□□□ -1.3
PRE5YMR314W GIP3Q03016 1276 aa6.95□□□□□ -1.3
PRE5YMR314W TAF12Q03761 539 aa6.95□□□□□ -1.3
PRE5YMR314W APC4Q04601 652 aa6.95□□□□□ -1.3
PRE5YMR314W YLR352WQ06479 807 aa6.95□□□□□ -1.3
PRE5YMR314W REX4Q08237 289 aa6.95□□□□□ -1.3
PRE5YMR314W MLH3Q12083 715 aa6.95□□□□□ -1.3
PRE5YMR314W YPL245WQ12179 454 aaKnown RBP6.95□□□□□ -1.3
PRE5YMR314W RUP1Q12242 671 aa6.95□□□□□ -1.3
PRE5YMR314W PRT1P06103 763 aaKnown RBP6.94□□□□□ -1.3
PRE5YMR314W LEU4P06208 619 aaKnown RBP6.94□□□□□ -1.3
PRE5YMR314W NPR1P22211 790 aa6.94□□□□□ -1.3
PRE5YMR314W APN1P22936 367 aa6.94□□□□□ -1.3
PRE5YMR314W TRX3P25372 127 aa6.94□□□□□ -1.3
PRE5YMR314W SPB1P25582 841 aaPredicted RBP6.94□□□□□ -1.3
PRE5YMR314W ZIP1P31111 875 aa6.94□□□□□ -1.3
PRE5YMR314W MDJ1P35191 511 aa6.94□□□□□ -1.3
PRE5YMR314W XBP1P40489 647 aa6.94□□□□□ -1.3
PRE5YMR314W PKP1P40530 394 aa6.94□□□□□ -1.3
PRE5YMR314W UBP6P43593 499 aaKnown RBP6.94□□□□□ -1.3
PRE5YMR314W IRC6P43615 237 aa6.94□□□□□ -1.3
PRE5YMR314W GUS1P46655 708 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
PRE5YMR314W RAD17P48581 401 aa6.94□□□□□ -1.3
PRE5YMR314W MUP1P50276 574 aa6.94□□□□□ -1.3
PRE5YMR314W YGR067CP53243 804 aa6.94□□□□□ -1.3
PRE5YMR314W KTR5P53966 522 aaPredicted RBP6.94□□□□□ -1.3
PRE5YMR314W SKI8Q02793 397 aaPredicted RBP6.94□□□□□ -1.3
PRE5YMR314W ADE13Q05911 482 aaKnown RBP6.94□□□□□ -1.3
PRE5YMR314W PDR8Q06149 701 aa6.94□□□□□ -1.3
PRE5YMR314W RAD34Q06665 692 aa6.94□□□□□ -1.3
PRE5YMR314W YEH1Q07804 573 aa6.94□□□□□ -1.3
PRE5YMR314W ACM1Q08981 209 aa6.94□□□□□ -1.3
PRE5YMR314W RUD3Q12234 484 aaKnown RBP6.94□□□□□ -1.3
PRE5YMR314W YRM1Q12340 786 aa6.94□□□□□ -1.3
PRE5YMR314W YPR064WQ12492 139 aa6.94□□□□□ -1.3
PRE5YMR314W MCM1P11746 286 aa6.93□□□□□ -1.3
PRE5YMR314W GAS1P22146 559 aaKnown RBP6.93□□□□□ -1.3
PRE5YMR314W CBF5P33322 483 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
PRE5YMR314W NUP120P35729 1037 aa6.93□□□□□ -1.3
PRE5YMR314W FAD1P38913 306 aa6.93□□□□□ -1.3
PRE5YMR314W PRM10P42946 383 aa6.93□□□□□ -1.3
PRE5YMR314W EMC2P47133 292 aaKnown RBP6.93□□□□□ -1.3
PRE5YMR314W COG6P53959 839 aa6.93□□□□□ -1.3
PRE5YMR314W CGI121Q03705 181 aaKnown RBP6.93□□□□□ -1.3
PRE5YMR314W YLR177WQ06251 628 aa6.93□□□□□ -1.3
PRE5YMR314W VAC14Q06708 880 aa6.93□□□□□ -1.3
PRE5YMR314W MDY2Q12285 212 aa6.93□□□□□ -1.3
PRE5YMR314W HXK2P04807 486 aaKnown RBP6.92□□□□□ -1.3
PRE5YMR314W CMD1P06787 147 aaKnown RBP6.92□□□□□ -1.3
PRE5YMR314W GCD2P12754 651 aaPredicted RBP6.92□□□□□ -1.3
PRE5YMR314W MAK32P23060 363 aa6.92□□□□□ -1.3
PRE5YMR314W ERG8P24521 451 aa6.92□□□□□ -1.3
PRE5YMR314W YIM1P28625 365 aa6.92□□□□□ -1.3
PRE5YMR314W CBP4P37267 147 aa6.92□□□□□ -1.3
PRE5YMR314W MAL32P38158 584 aa6.92□□□□□ -1.3
PRE5YMR314W NMD5P46970 1048 aa6.92□□□□□ -1.3
PRE5YMR314W YJR141WP47172 347 aaPredicted RBP6.92□□□□□ -1.3
PRE5YMR314W SLT2Q00772 484 aa6.92□□□□□ -1.3
PRE5YMR314W HPT1Q04178 221 aaKnown RBP6.92□□□□□ -1.3
PRE5YMR314W Q0010Q9ZZX9 128 aa6.92□□□□□ -1.3
PRE5YMR314W FLO9P39712 1322 aa6.92□□□□□ -1.3
PRE5YMR314W ARD1P07347 238 aaPredicted RBP6.91□□□□□ -1.3
PRE5YMR314W YSF3P0C074 85 aaPredicted RBP6.91□□□□□ -1.3
PRE5YMR314W TY2A-LR1P0C2J4 438 aa6.91□□□□□ -1.3
PRE5YMR314W TY2A-FP0CX61 438 aa6.91□□□□□ -1.3
PRE5YMR314W TY2A-GR2P0CX62 438 aa6.91□□□□□ -1.3
PRE5YMR314W SPO16P17122 198 aa6.91□□□□□ -1.3
PRE5YMR314W AMD2P22580 549 aa6.91□□□□□ -1.3
PRE5YMR314W TY2A-CP25383 438 aa6.91□□□□□ -1.3
PRE5YMR314W AAD3P25612 363 aa6.91□□□□□ -1.3
PRE5YMR314W FUN30P31380 1131 aa6.91□□□□□ -1.3
PRE5YMR314W GRE3P38715 327 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
PRE5YMR314W HOS4P40480 1083 aa6.91□□□□□ -1.3
PRE5YMR314W YRB1P41920 201 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms