RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W COX16P47081 118 aa2.37□□□□□ -2.03
UBP15YMR304W LIA1P47120 325 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W TAF4P50105 388 aa2.37□□□□□ -2.03
UBP15YMR304W RMI1Q02685 241 aa2.37□□□□□ -2.03
UBP15YMR304W CDC123Q05791 360 aa2.37□□□□□ -2.03
UBP15YMR304W FMP16Q12497 93 aa2.37□□□□□ -2.03
UBP15YMR304W BI3Q9ZZW7 517 aa2.37□□□□□ -2.03
UBP15YMR304W MTF1P14908 341 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W DBF4P32325 704 aa2.37□□□□□ -2.03
UBP15YMR304W COT1P32798 439 aa2.37□□□□□ -2.03
UBP15YMR304W MRPL3P36516 390 aa2.37□□□□□ -2.03
UBP15YMR304W GDT1P38301 280 aaPredicted RBP2.37□□□□□ -2.03
UBP15YMR304W YEL025CP39991 1188 aa2.37□□□□□ -2.03
UBP15YMR304W YIL108WP40483 696 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W RTT101P47050 842 aa2.37□□□□□ -2.03
UBP15YMR304W UBC12P52491 188 aa2.37□□□□□ -2.03
UBP15YMR304W STR3P53101 465 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W ARP4P80428 489 aa2.37□□□□□ -2.03
UBP15YMR304W YDR248CQ03786 193 aa2.37□□□□□ -2.03
UBP15YMR304W BSC2Q05611 235 aa2.37□□□□□ -2.03
UBP15YMR304W TSR2Q06672 205 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W MCM21Q06675 368 aa2.37□□□□□ -2.03
UBP15YMR304W HAL9Q12180 1030 aa2.37□□□□□ -2.03
UBP15YMR304W AI3P03877 415 aa2.37□□□□□ -2.03
UBP15YMR304W RPS28BP0C0X0 67 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W RED1P14291 827 aa2.37□□□□□ -2.03
UBP15YMR304W SIR1P21691 654 aa2.37□□□□□ -2.03
UBP15YMR304W AIM17P23180 465 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W BEM1P29366 551 aa2.37□□□□□ -2.03
UBP15YMR304W OMA1P36163 345 aa2.37□□□□□ -2.03
UBP15YMR304W PCH2P38126 564 aa2.37□□□□□ -2.03
UBP15YMR304W MAL32P38158 584 aa2.37□□□□□ -2.03
UBP15YMR304W YBR138CP38277 524 aa2.37□□□□□ -2.03
UBP15YMR304W PTC7P38797 343 aa2.37□□□□□ -2.03
UBP15YMR304W BAT1P38891 393 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W INP51P40559 946 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W SNM1P40993 198 aa2.37□□□□□ -2.03
UBP15YMR304W PSP2P50109 593 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W RAI1P53063 387 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W MAL12P53341 584 aa2.37□□□□□ -2.03
UBP15YMR304W CNM67P53865 581 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W MET14Q02196 202 aa2.37□□□□□ -2.03
UBP15YMR304W REC102Q02721 264 aa2.37□□□□□ -2.03
UBP15YMR304W MLH3Q12083 715 aa2.37□□□□□ -2.03
UBP15YMR304W RBD2Q12270 262 aa2.37□□□□□ -2.03
UBP15YMR304W YOP1Q12402 180 aa2.37□□□□□ -2.03
UBP15YMR304W PAA1Q12447 191 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W PGA3Q12746 312 aaKnown RBP2.37□□□□□ -2.03
UBP15YMR304W RPS28AQ3E7X9 67 aaPredicted RBP2.37□□□□□ -2.03
UBP15YMR304W YIL002W-AQ3E7Z5 69 aa2.37□□□□□ -2.03
UBP15YMR304W YOR111WQ99210 232 aa2.37□□□□□ -2.03
UBP15YMR304W LAT1P12695 482 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W RPL8AP17076 256 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W RPL8BP29453 256 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W YEF1P32622 495 aa2.36□□□□□ -2.03
UBP15YMR304W MNS1P32906 549 aa2.36□□□□□ -2.03
UBP15YMR304W TOD6P34219 525 aa2.36□□□□□ -2.03
UBP15YMR304W MTH1P35198 433 aa2.36□□□□□ -2.03
UBP15YMR304W YKT6P36015 200 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W RPF2P36160 344 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W PRS2P38620 318 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W PAN2P53010 1115 aaPredicted RBP2.36□□□□□ -2.03
UBP15YMR304W TAF6P53040 516 aa2.36□□□□□ -2.03
UBP15YMR304W TAM41P53230 385 aa2.36□□□□□ -2.03
UBP15YMR304W OKP1P53298 406 aa2.36□□□□□ -2.03
UBP15YMR304W EGD1Q02642 157 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W SWF1Q04629 336 aa2.36□□□□□ -2.03
UBP15YMR304W SPR28Q04921 423 aa2.36□□□□□ -2.03
UBP15YMR304W EMG1Q06287 252 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W PEX15Q08215 383 aa2.36□□□□□ -2.03
UBP15YMR304W YLL058WQ12198 575 aa2.36□□□□□ -2.03
UBP15YMR304W LDB17Q12342 491 aa2.36□□□□□ -2.03
UBP15YMR304W ISA2Q12425 185 aa2.36□□□□□ -2.03
UBP15YMR304W RIB3Q99258 208 aa2.36□□□□□ -2.03
UBP15YMR304W RAD1P06777 1100 aa2.36□□□□□ -2.03
UBP15YMR304W CMD1P06787 147 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W YOX1P34161 385 aa2.36□□□□□ -2.03
UBP15YMR304W SIP3P38717 1229 aa2.36□□□□□ -2.03
UBP15YMR304W UBA4P38820 440 aa2.36□□□□□ -2.03
UBP15YMR304W GEM1P39722 662 aa2.36□□□□□ -2.03
UBP15YMR304W YRB2P40517 327 aa2.36□□□□□ -2.03
UBP15YMR304W YGR201CP42936 225 aa2.36□□□□□ -2.03
UBP15YMR304W YJL043WP47053 257 aa2.36□□□□□ -2.03
UBP15YMR304W RNR4P49723 345 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W YGL235WP53071 178 aa2.36□□□□□ -2.03
UBP15YMR304W YGR079WP53249 370 aa2.36□□□□□ -2.03
UBP15YMR304W CAF40P53829 373 aa2.36□□□□□ -2.03
UBP15YMR304W SLT2Q00772 484 aa2.36□□□□□ -2.03
UBP15YMR304W MTG1Q03151 367 aaPredicted RBP2.36□□□□□ -2.03
UBP15YMR304W SLD5Q03406 294 aa2.36□□□□□ -2.03
UBP15YMR304W TPP1Q03796 238 aa2.36□□□□□ -2.03
UBP15YMR304W APC9Q12107 265 aa2.36□□□□□ -2.03
UBP15YMR304W YKL033W-AQ86ZR7 236 aa2.36□□□□□ -2.03
UBP15YMR304W DDI2P0CH63 225 aa2.36□□□□□ -2.03
UBP15YMR304W DDI3P0CH64 225 aa2.36□□□□□ -2.03
UBP15YMR304W UTR1P21373 530 aa2.36□□□□□ -2.03
UBP15YMR304W SLM5P25345 492 aaKnown RBP2.36□□□□□ -2.03
UBP15YMR304W CLB6P32943 380 aa2.36□□□□□ -2.03
UBP15YMR304W FLO10P36170 1169 aa2.36□□□□□ -2.03
UBP15YMR304W ECM13P38195 257 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms