RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	SPF1	P39986	1215 aa	Known RBP	4.21	□□□□□ -1.74
PEP5	YMR231W	ATM1	P40416	690 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	EFM6	P53970	246 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	SKY1	Q03656	742 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	YDR249C	Q03787	373 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	DLT1	Q04216	342 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	APC4	Q04601	652 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	SSK1	Q07084	712 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	ICT1	Q12385	394 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	COX6	P00427	148 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	ALG7	P07286	448 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	PET54	P10834	293 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YCK1	P23291	538 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	PEX1	P24004	1043 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	GLN1	P32288	370 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	ASF2	P32448	525 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	PTH2	P34222	208 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	TIF11	P38912	153 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	SER2	P42941	309 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YFR018C	P43599	363 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	ATH1	P48016	1211 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MRPL50	P53724	139 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	CWC24	P53769	259 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	TIM11	P81449	96 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	YPL068C	Q02749	293 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YPL071C	Q02864	156 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MSC2	Q03455	724 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	HER2	Q03557	464 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YLR455W	Q06188	304 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	RRP9	Q06506	573 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	RCL1	Q08096	367 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	YNG1	Q08465	219 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	BSC1	Q12140	328 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	FMP16	Q12497	93 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YLR149C	Q99296	730 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	NSP1	P14907	823 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	MET16	P18408	261 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	RAM1	P22007	431 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	GCD11	P32481	527 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	MTC2	P34246	357 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	GND1	P38720	489 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	IPI1	P38803	334 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	GEM1	P39722	662 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	NDE1	P40215	560 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MET12	P46151	657 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	RPS10B	P46784	105 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	YJR107W	P47145	328 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	KTR6	P54070	446 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	TRM82	Q03774	444 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	EMI1	Q04406	187 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	RPS10A	Q08745	105 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	ENV7	Q12003	364 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YOR289W	Q12012	251 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	THP3	Q12049	470 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	NUS1	Q12063	375 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	YLR049C	Q12110	428 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	ATG31	Q12421	196 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	PHO80	P20052	293 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	HXT2	P23585	541 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	PHO3	P24031	467 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	GAC1	P28006	793 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	SYN8	P31377	255 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	COQ2	P32378	372 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MSS1	P32559	526 aa	Predicted RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	SHP1	P34223	423 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	CTF13	P35203	478 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	APM3	P38153	483 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	SHE3	P38272	425 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	YBR137W	P38276	179 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MXR1	P40029	184 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	RPE1	P46969	238 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	PFD1	P46988	109 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	SCY1	P53009	804 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	EFM5	P53200	248 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	ARE2	P53629	642 aa	Known RBP	4.2	□□□□□ -1.74
PEP5	YMR231W	PEX13	P80667	386 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	SPP1	Q03012	353 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	MRPL35	Q06678	367 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	NBP2	Q12163	236 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	NCR1	Q12200	1170 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	LAG2	Q92325	660 aa		4.2	□□□□□ -1.74
PEP5	YMR231W	TRP3	P00937	484 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	GAL80	P04387	435 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	LEU1	P07264	779 aa	Known RBP	4.19	□□□□□ -1.74
PEP5	YMR231W	CNB1	P25296	175 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	UBC8	P28263	218 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	PTM1	P32857	523 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	SUR1	P33300	382 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	ANR2	P36090	516 aa	Predicted RBP	4.19	□□□□□ -1.74
PEP5	YMR231W	YKR051W	P36142	418 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	GLG1	P36143	616 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	MRPL3	P36516	390 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	RRP4	P38792	359 aa	Known RBP	4.19	□□□□□ -1.74
PEP5	YMR231W	SBE22	P38814	852 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	ALP1	P38971	573 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PEP5	YMR231W	MGS1	P40151	587 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	FET4	P40988	552 aa		4.19	□□□□□ -1.74
PEP5	YMR231W	ROK1	P45818	564 aa	Predicted RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms