RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C TUB1P09733 447 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C RPL4AP10664 362 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C HSC82P15108 705 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C CLB2P24869 491 aa4.51□□□□□ -1.69
EAR1YMR171C GFD2P25370 566 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C DMC1P25453 334 aa4.51□□□□□ -1.69
EAR1YMR171C RPS5P26783 225 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C ATP7P30902 174 aa4.51□□□□□ -1.69
EAR1YMR171C RME1P32338 300 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C YHR054CP38780 354 aa4.51□□□□□ -1.69
EAR1YMR171C ARB1P40024 610 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C IAH1P41734 238 aa4.51□□□□□ -1.69
EAR1YMR171C FMP32P43557 207 aa4.51□□□□□ -1.69
EAR1YMR171C ZAP1P47043 880 aa4.51□□□□□ -1.69
EAR1YMR171C EMC2P47133 292 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C RPL4BP49626 362 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C YTP1P53584 459 aa4.51□□□□□ -1.69
EAR1YMR171C VPS9P54787 451 aa4.51□□□□□ -1.69
EAR1YMR171C PRO2P54885 456 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C SRL4Q03085 281 aa4.51□□□□□ -1.69
EAR1YMR171C YET2Q04210 160 aa4.51□□□□□ -1.69
EAR1YMR171C AIM6Q07716 390 aa4.51□□□□□ -1.69
EAR1YMR171C SPE3Q12074 293 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C LDB17Q12342 491 aa4.51□□□□□ -1.69
EAR1YMR171C HSH49Q99181 213 aaPredicted RBP4.51□□□□□ -1.69
EAR1YMR171C AI5_ALPHAQ9ZZX1 630 aa4.51□□□□□ -1.69
EAR1YMR171C YPR089WO13585 888 aa4.51□□□□□ -1.69
EAR1YMR171C SUI3P09064 285 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C WHI2P12611 486 aa4.51□□□□□ -1.69
EAR1YMR171C CNA1P23287 553 aa4.51□□□□□ -1.69
EAR1YMR171C GID7P25569 745 aa4.51□□□□□ -1.69
EAR1YMR171C YCL049CP25577 312 aa4.51□□□□□ -1.69
EAR1YMR171C YCL068CP25593 260 aa4.51□□□□□ -1.69
EAR1YMR171C PRR1P28708 518 aa4.51□□□□□ -1.69
EAR1YMR171C NDI1P32340 513 aa4.51□□□□□ -1.69
EAR1YMR171C HXT3P32466 567 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C KAR9P32526 644 aa4.51□□□□□ -1.69
EAR1YMR171C LOT5P34234 306 aa4.51□□□□□ -1.69
EAR1YMR171C PDX3P38075 228 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C YPT10P38146 199 aa4.51□□□□□ -1.69
EAR1YMR171C SDH8P38345 138 aa4.51□□□□□ -1.69
EAR1YMR171C UTP9P38882 575 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C AIM18P38884 321 aa4.51□□□□□ -1.69
EAR1YMR171C SEC31P38968 1273 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C SEC28P40509 296 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C YJL132WP47014 750 aa4.51□□□□□ -1.69
EAR1YMR171C RPS7BP48164 190 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C VPS73P53142 486 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C ARA2Q04212 335 aa4.51□□□□□ -1.69
EAR1YMR171C DYN3Q04949 312 aa4.51□□□□□ -1.69
EAR1YMR171C CDC123Q05791 360 aa4.51□□□□□ -1.69
EAR1YMR171C ASA1Q06822 443 aa4.51□□□□□ -1.69
EAR1YMR171C DIS3Q08162 1001 aaKnown RBP4.51□□□□□ -1.69
EAR1YMR171C NRT1Q08485 598 aa4.51□□□□□ -1.69
EAR1YMR171C ZPS1Q12512 249 aa4.51□□□□□ -1.69
EAR1YMR171C SEM1O94742 89 aa4.5□□□□□ -1.69
EAR1YMR171C NMT1P14743 455 aa4.5□□□□□ -1.69
EAR1YMR171C SAT4P25333 603 aaKnown RBP4.5□□□□□ -1.69
EAR1YMR171C YCR061WP25639 631 aa4.5□□□□□ -1.69
EAR1YMR171C AEP1P32493 518 aa4.5□□□□□ -1.69
EAR1YMR171C TIF3P34167 436 aaKnown RBP4.5□□□□□ -1.69
EAR1YMR171C AVT2P39981 480 aa4.5□□□□□ -1.69
EAR1YMR171C UBP7P40453 1071 aa4.5□□□□□ -1.69
EAR1YMR171C YFL012WP43580 148 aa4.5□□□□□ -1.69
EAR1YMR171C SAP4P53036 818 aa4.5□□□□□ -1.69
EAR1YMR171C IMA1P53051 589 aa4.5□□□□□ -1.69
EAR1YMR171C GET1P53192 235 aa4.5□□□□□ -1.69
EAR1YMR171C PEX31P53203 462 aa4.5□□□□□ -1.69
EAR1YMR171C ESF2P53743 316 aaKnown RBP4.5□□□□□ -1.69
EAR1YMR171C NOP13P53883 403 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
EAR1YMR171C SKI8Q02793 397 aaPredicted RBP4.5□□□□□ -1.69
EAR1YMR171C HPT1Q04178 221 aaKnown RBP4.5□□□□□ -1.69
EAR1YMR171C IRC10Q08118 586 aa4.5□□□□□ -1.69
EAR1YMR171C TGS1Q12052 315 aa4.5□□□□□ -1.69
EAR1YMR171C VPS54Q12071 889 aa4.5□□□□□ -1.69
EAR1YMR171C APC9Q12107 265 aa4.5□□□□□ -1.69
EAR1YMR171C NSL1Q12143 216 aa4.5□□□□□ -1.69
EAR1YMR171C ATG34Q12292 412 aa4.5□□□□□ -1.69
EAR1YMR171C EFG1Q3E705 233 aaKnown RBP4.5□□□□□ -1.69
EAR1YMR171C LRE1P25579 583 aaKnown RBP4.49□□□□□ -1.69
EAR1YMR171C CSM1P25651 190 aa4.49□□□□□ -1.69
EAR1YMR171C ARP2P32381 391 aaKnown RBP4.49□□□□□ -1.69
EAR1YMR171C CDC5P32562 705 aa4.49□□□□□ -1.69
EAR1YMR171C SSE2P32590 693 aaKnown RBP4.49□□□□□ -1.69
EAR1YMR171C EMP70P32802 667 aa4.49□□□□□ -1.69
EAR1YMR171C KDX1P36005 433 aa4.49□□□□□ -1.69
EAR1YMR171C ARN1P38731 627 aa4.49□□□□□ -1.69
EAR1YMR171C NPT1P39683 429 aaKnown RBP4.49□□□□□ -1.69
EAR1YMR171C HPM1P40481 377 aa4.49□□□□□ -1.69
EAR1YMR171C YGR127WP53275 312 aa4.49□□□□□ -1.69
EAR1YMR171C YNL010WP53981 241 aaKnown RBP4.49□□□□□ -1.69
EAR1YMR171C YKR005CQ02203 525 aa4.49□□□□□ -1.69
EAR1YMR171C GMC2Q06201 188 aa4.49□□□□□ -1.69
EAR1YMR171C SEC10Q06245 871 aa4.49□□□□□ -1.69
EAR1YMR171C GGA1Q06336 557 aa4.49□□□□□ -1.69
EAR1YMR171C APC5Q08683 685 aa4.49□□□□□ -1.69
EAR1YMR171C MUM3Q08750 479 aa4.49□□□□□ -1.69
EAR1YMR171C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
EAR1YMR171C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
EAR1YMR171C STE2D6VTK4 431 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms