RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO20	YMR017W	VTC2	P43585	828 aa		4.26	□□□□□ -1.73
SPO20	YMR017W	YDL186W	P48568	277 aa		4.26	□□□□□ -1.73
SPO20	YMR017W	COS10	P52924	374 aa		4.26	□□□□□ -1.73
SPO20	YMR017W	RMD9	P53140	646 aa	Known RBP	4.26	□□□□□ -1.73
SPO20	YMR017W	YGR250C	P53316	781 aa	Known RBP	4.26	□□□□□ -1.73
SPO20	YMR017W	HEM2	P05373	342 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	GDH1	P07262	454 aa	Known RBP	4.25	□□□□□ -1.73
SPO20	YMR017W	ATR1	P13090	542 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	GIR2	Q03768	265 aa	Predicted RBP	4.25	□□□□□ -1.73
SPO20	YMR017W	SOV1	Q04748	898 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	RTT103	Q05543	409 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	YTH1	Q06102	208 aa	Predicted RBP	4.25	□□□□□ -1.73
SPO20	YMR017W	SIL1	Q08199	421 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	YRF1-4	O13559	1382 aa		4.25	□□□□□ -1.73
SPO20	YMR017W	MCK1	P21965	375 aa	Known RBP	4.24	□□□□□ -1.73
SPO20	YMR017W	AGA1	P32323	725 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	REC114	P32841	428 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	NIP100	P33420	868 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	HCS1	P34243	683 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	FRE2	P36033	711 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	RSM22	P36056	628 aa		4.24	□□□□□ -1.73
SPO20	YMR017W	TFG2	P41896	400 aa	Predicted RBP	4.24	□□□□□ -1.73
SPO20	YMR017W	NCS2	P53923	493 aa	Predicted RBP	4.24	□□□□□ -1.73
SPO20	YMR017W	PRP16	P15938	1071 aa	Predicted RBP	4.23	□□□□□ -1.73
SPO20	YMR017W	PUT3	P25502	979 aa	Predicted RBP	4.23	□□□□□ -1.73
SPO20	YMR017W	GYP6	P32806	458 aa		4.23	□□□□□ -1.73
SPO20	YMR017W	MPE1	P35728	441 aa	Known RBP	4.23	□□□□□ -1.73
SPO20	YMR017W	ARX1	Q03862	593 aa	Known RBP	4.23	□□□□□ -1.73
SPO20	YMR017W	CTF3	Q12748	733 aa		4.23	□□□□□ -1.73
SPO20	YMR017W	YLR278C	Q05854	1341 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	GPH1	P06738	902 aa	Known RBP	4.22	□□□□□ -1.73
SPO20	YMR017W	CLC1	P17891	233 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	RML2	P32611	393 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	KRE9	P39005	276 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	CCT4	P39078	528 aa	Known RBP	4.22	□□□□□ -1.73
SPO20	YMR017W	ISC1	P40015	477 aa	Known RBP	4.22	□□□□□ -1.73
SPO20	YMR017W	GCD10	P41814	478 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	ARK1	P53974	638 aa		4.22	□□□□□ -1.73
SPO20	YMR017W	ARA1	P38115	344 aa		4.21	□□□□□ -1.74
SPO20	YMR017W	CCT2	P39076	527 aa	Known RBP	4.21	□□□□□ -1.74
SPO20	YMR017W	SSU1	P41930	458 aa		4.21	□□□□□ -1.74
SPO20	YMR017W	FMS1	P50264	508 aa		4.21	□□□□□ -1.74
SPO20	YMR017W	RIP1	P08067	215 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	REC107	P21651	314 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	RNA14	P25298	677 aa	Known RBP	4.2	□□□□□ -1.74
SPO20	YMR017W	RPC53	P25441	422 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	NDI1	P32340	513 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	PRP21	P32524	280 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO20	YMR017W	VHC1	P38329	1120 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	AVT4	P50944	713 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	OGG1	P53397	376 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO20	YMR017W	WSC2	P53832	503 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	DSL1	P53847	754 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	PIR3	Q03180	325 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	RRP45	Q05636	305 aa	Known RBP	4.2	□□□□□ -1.74
SPO20	YMR017W	ISN1	Q99312	450 aa		4.2	□□□□□ -1.74
SPO20	YMR017W	YAR066W	P0CX18	203 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YHR214W	P0CX19	203 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YCR100C	P25606	316 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YCR051W	P25631	222 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YME2	P32843	850 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	STB6	P36085	766 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YCR041W	P37265	110 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	YHR218W	P38899	603 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	RRT5	P43607	289 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	TRS85	P46944	698 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	PCP1	P53259	346 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	PNG1	Q02890	363 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	HSP31	Q04432	237 aa		4.19	□□□□□ -1.74
SPO20	YMR017W	LPD1	P09624	499 aa	Known RBP	4.18	□□□□□ -1.74
SPO20	YMR017W	SNT1	P25357	1226 aa		4.18	□□□□□ -1.74
SPO20	YMR017W	CRM1	P30822	1084 aa	Known RBP	4.18	□□□□□ -1.74
SPO20	YMR017W	NTC20	P38302	140 aa	Predicted RBP	4.18	□□□□□ -1.74
SPO20	YMR017W	IDP2	P41939	412 aa		4.18	□□□□□ -1.74
SPO20	YMR017W	POP6	P53218	158 aa		4.18	□□□□□ -1.74
SPO20	YMR017W	IMP4	P53941	290 aa	Known RBP	4.18	□□□□□ -1.74
SPO20	YMR017W	YDR387C	Q04162	555 aa		4.18	□□□□□ -1.74
SPO20	YMR017W	ROY1	Q04847	553 aa		4.18	□□□□□ -1.74
SPO20	YMR017W	CPR1	P14832	162 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	PDX1	P16451	410 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	RPI1	P23250	407 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	ADK2	P26364	225 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	APE2	P32454	952 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	ECM25	P32525	599 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	GLC7	P32598	312 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	YJL132W	P47014	750 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	YIP1	P53039	248 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	YGL138C	P53122	345 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	ART5	P53244	586 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	MSO1	P53604	210 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	CAF40	P53829	373 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	BNI5	P53890	448 aa	Known RBP	4.17	□□□□□ -1.74
SPO20	YMR017W	KAP120	Q02932	1032 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	ODC1	Q03028	310 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	YDR131C	Q03899	556 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	VAM3	Q12241	283 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	AFI1	Q99222	893 aa		4.17	□□□□□ -1.74
SPO20	YMR017W	HIP1	P06775	603 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	SEC63	P14906	663 aa		4.16	□□□□□ -1.74
SPO20	YMR017W	SRV2	P17555	526 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms