RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C NAT2P37293 288 aa3.84□□□□□ -1.79
RPF2YKR081C YMR147WP40218 223 aaKnown RBP3.84□□□□□ -1.79
RPF2YKR081C YGR210CP42942 411 aa3.84□□□□□ -1.79
RPF2YKR081C YGL108CP53139 140 aa3.84□□□□□ -1.79
RPF2YKR081C POP6P53218 158 aa3.84□□□□□ -1.79
RPF2YKR081C ELP3Q02908 557 aaKnown RBP3.84□□□□□ -1.79
RPF2YKR081C ODC1Q03028 310 aa3.84□□□□□ -1.79
RPF2YKR081C ADD37Q03233 198 aa3.84□□□□□ -1.79
RPF2YKR081C THP3Q12049 470 aaKnown RBP3.84□□□□□ -1.79
RPF2YKR081C YAR066WP0CX18 203 aa3.83□□□□□ -1.8
RPF2YKR081C YHR214WP0CX19 203 aa3.83□□□□□ -1.8
RPF2YKR081C YCR100CP25606 316 aa3.83□□□□□ -1.8
RPF2YKR081C ARO2P28777 376 aaKnown RBP3.83□□□□□ -1.8
RPF2YKR081C YEL045CP32616 141 aa3.83□□□□□ -1.8
RPF2YKR081C PRE5P40302 234 aaKnown RBP3.83□□□□□ -1.8
RPF2YKR081C PNG1Q02890 363 aa3.83□□□□□ -1.8
RPF2YKR081C PAL1Q05518 499 aaKnown RBP3.83□□□□□ -1.8
RPF2YKR081C MRD1Q06106 887 aaKnown RBP3.83□□□□□ -1.8
RPF2YKR081C RHO2P06781 192 aa3.82□□□□□ -1.8
RPF2YKR081C YIM1P28625 365 aa3.82□□□□□ -1.8
RPF2YKR081C GYP6P32806 458 aa3.82□□□□□ -1.8
RPF2YKR081C SEC66P33754 206 aa3.82□□□□□ -1.8
RPF2YKR081C CMC1P36064 111 aa3.82□□□□□ -1.8
RPF2YKR081C SPO22P40511 975 aa3.82□□□□□ -1.8
RPF2YKR081C YPL199CQ08954 240 aa3.82□□□□□ -1.8
RPF2YKR081C ATG29Q12092 213 aa3.82□□□□□ -1.8
RPF2YKR081C CPR4P25334 318 aa3.81□□□□□ -1.8
RPF2YKR081C SDH3P33421 198 aa3.81□□□□□ -1.8
RPF2YKR081C VID24P38263 362 aa3.81□□□□□ -1.8
RPF2YKR081C NCS2P53923 493 aaPredicted RBP3.81□□□□□ -1.8
RPF2YKR081C TAP42Q04372 366 aa3.81□□□□□ -1.8
RPF2YKR081C YLR108CQ12259 485 aa3.81□□□□□ -1.8
RPF2YKR081C YML133CQ03099 1374 aa3.8□□□□□ -1.8
RPF2YKR081C YLL067CQ07888 1374 aa3.8□□□□□ -1.8
RPF2YKR081C YLL066CQ99208 1374 aa3.8□□□□□ -1.8
RPF2YKR081C ATP10P18496 279 aa3.8□□□□□ -1.8
RPF2YKR081C RAD14P28519 371 aa3.8□□□□□ -1.8
RPF2YKR081C REC114P32841 428 aa3.8□□□□□ -1.8
RPF2YKR081C REE1P40893 198 aa3.8□□□□□ -1.8
RPF2YKR081C TRS85P46944 698 aa3.8□□□□□ -1.8
RPF2YKR081C SDT1P53078 280 aa3.8□□□□□ -1.8
RPF2YKR081C MRP51Q02950 344 aa3.8□□□□□ -1.8
RPF2YKR081C YDL121CQ07541 149 aa3.8□□□□□ -1.8
RPF2YKR081C TMS1Q12116 473 aa3.8□□□□□ -1.8
RPF2YKR081C SPB1P25582 841 aaPredicted RBP3.79□□□□□ -1.8
RPF2YKR081C AFG1P32317 509 aa3.79□□□□□ -1.8
RPF2YKR081C MIX23P38162 196 aa3.79□□□□□ -1.8
RPF2YKR081C FAA2P39518 744 aa3.79□□□□□ -1.8
RPF2YKR081C MET18P40469 1032 aa3.79□□□□□ -1.8
RPF2YKR081C HXT14P42833 540 aa3.79□□□□□ -1.8
RPF2YKR081C SSN8P47821 323 aa3.79□□□□□ -1.8
RPF2YKR081C RMD9P53140 646 aaKnown RBP3.79□□□□□ -1.8
RPF2YKR081C TIM10P87108 93 aa3.79□□□□□ -1.8
RPF2YKR081C TSR1Q07381 788 aaKnown RBP3.79□□□□□ -1.8
RPF2YKR081C MUM3Q08750 479 aa3.79□□□□□ -1.8
RPF2YKR081C RRD2Q12461 358 aa3.79□□□□□ -1.8
RPF2YKR081C ARG3P05150 338 aa3.78□□□□□ -1.8
RPF2YKR081C SAM1P10659 382 aaKnown RBP3.78□□□□□ -1.8
RPF2YKR081C SAM2P19358 384 aaKnown RBP3.78□□□□□ -1.8
RPF2YKR081C SPS22P25380 463 aa3.78□□□□□ -1.8
RPF2YKR081C PMT1P33775 817 aa3.78□□□□□ -1.8
RPF2YKR081C YCR041WP37265 110 aa3.78□□□□□ -1.8
RPF2YKR081C THI2P38141 450 aa3.78□□□□□ -1.8
RPF2YKR081C UTP9P38882 575 aaKnown RBP3.78□□□□□ -1.8
RPF2YKR081C ARF3P40994 183 aaRIP-Chip data3.78□□□□□ -1.8not detected
RPF2YKR081C YGR149WP48236 432 aa3.78□□□□□ -1.8
RPF2YKR081C GOR1P53839 350 aa3.78□□□□□ -1.8
RPF2YKR081C TOF1P53840 1238 aa3.78□□□□□ -1.8
RPF2YKR081C JJJ1P53863 590 aa3.78□□□□□ -1.8
RPF2YKR081C RQC1Q05468 723 aaKnown RBP3.78□□□□□ -1.8
RPF2YKR081C RIM20Q12033 661 aa3.78□□□□□ -1.8
RPF2YKR081C MED1Q12321 566 aa3.78□□□□□ -1.8
RPF2YKR081C RRI2Q12348 645 aa3.78□□□□□ -1.8
RPF2YKR081C ISY1P21374 235 aaPredicted RBP3.77□□□□□ -1.81
RPF2YKR081C PTH1P38876 190 aaKnown RBP3.77□□□□□ -1.81
RPF2YKR081C TFG2P41896 400 aaPredicted RBP3.77□□□□□ -1.81
RPF2YKR081C WWM1P43582 211 aaKnown RBP3.77□□□□□ -1.81
RPF2YKR081C RRG7Q08774 242 aaPredicted RBP3.77□□□□□ -1.81
RPF2YKR081C SPS4P09937 338 aa3.76□□□□□ -1.81
RPF2YKR081C GPI10P30777 616 aa3.76□□□□□ -1.81
RPF2YKR081C STB6P36085 766 aa3.76□□□□□ -1.81
RPF2YKR081C MST28P39552 234 aa3.76□□□□□ -1.81
RPF2YKR081C OST1P41543 476 aaKnown RBP3.76□□□□□ -1.81
RPF2YKR081C YIP1P53039 248 aa3.76□□□□□ -1.81
RPF2YKR081C GIR2Q03768 265 aaPredicted RBP3.76□□□□□ -1.81
RPF2YKR081C MRPL35Q06678 367 aa3.76□□□□□ -1.81
RPF2YKR081C MRP7P12687 371 aa3.75□□□□□ -1.81
RPF2YKR081C IDH2P28241 369 aaKnown RBP3.75□□□□□ -1.81
RPF2YKR081C RRT2P38332 387 aa3.75□□□□□ -1.81
RPF2YKR081C YGL039WP53183 348 aaKnown RBP3.75□□□□□ -1.81
RPF2YKR081C PCP1P53259 346 aa3.75□□□□□ -1.81
RPF2YKR081C DSL1P53847 754 aa3.75□□□□□ -1.81
RPF2YKR081C HRT3Q12347 344 aa3.75□□□□□ -1.81
RPF2YKR081C RAD61Q99359 647 aa3.75□□□□□ -1.81
RPF2YKR081C CLN3P13365 580 aa3.74□□□□□ -1.81
RPF2YKR081C NIP100P33420 868 aa3.74□□□□□ -1.81
RPF2YKR081C SWD3P38123 315 aa3.74□□□□□ -1.81
RPF2YKR081C RIB5P38145 238 aa3.74□□□□□ -1.81
RPF2YKR081C VMA13P41807 478 aaKnown RBP3.74□□□□□ -1.81
RPF2YKR081C HSP31Q04432 237 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms