RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	YJL049W	P47048	450 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	NNF2	P53253	936 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	ROY1	Q04847	553 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	SAM3	Q08986	587 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	HRP1	Q99383	534 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	Q0010	Q9ZZX9	128 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	HMG1	P12683	1054 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	PPH21	P23594	369 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	CLB1	P24868	471 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	AAR2	P32357	355 aa	Predicted RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	GCD11	P32481	527 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	RIM101	P33400	625 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	YOR062C	P36025	268 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	FMP46	P36141	133 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	MET30	P39014	640 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	ISC1	P40015	477 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	SER33	P40510	469 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	YJR030C	P47101	745 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	GET1	P53192	235 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	YPL071C	Q02864	156 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	CTK1	Q03957	528 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	DYN3	Q04949	312 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	THI73	Q07904	523 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	MCA1	Q08601	432 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	FMP40	Q08968	688 aa	Predicted RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	YLR049C	Q12110	428 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	BSC1	Q12140	328 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	WTM1	Q12363	437 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	YKL033W-A	Q86ZR7	236 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	STE7	P06784	515 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	THR1	P17423	357 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	UGP1	P32861	499 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	MRPL15	P36523	253 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	STP2	P38704	541 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	MAM33	P40513	266 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	BNA6	P43619	295 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	FMP33	P46998	180 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	ABZ2	Q03266	374 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	MFB1	Q04922	465 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YLR446W	Q06204	433 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	TGS1	Q12052	315 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	APC9	Q12107	265 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	ERG20	P08524	352 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	RPP1B	P10622	106 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	TFS1	P14306	219 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	TAH1	P25638	111 aa	Predicted RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	YJU2	P28320	278 aa	Predicted RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	DEP1	P31385	405 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	NGG1	P32494	702 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	ZRG8	P40021	1076 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	RIO2	P40160	425 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	YIL086C	P40503	102 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	SNL1	P40548	159 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	SEC27	P41811	889 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	IMD4	P50094	524 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	ARI1	P53111	347 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	OAZ1	Q02803	292 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	APC2	Q12440	853 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	LAG2	Q92325	660 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	TY4B-P	A0A0B7P3V8	1104 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	QCR7	P00128	127 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	TPK2	P06245	380 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	COS2	P0CX12	379 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	COS3	P0CX13	379 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	AAC3	P18238	307 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	SAN1	P22470	610 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	RPS1B	P23248	255 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	ECM15	P35195	104 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	RRN3	P36070	627 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YKR023W	P36119	530 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	RIC1	P40395	1056 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	COS4	P43542	379 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YGL176C	P46945	554 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	GTO1	P48239	356 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	TIM13	P53299	105 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	DSL1	P53847	754 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	AQR1	P53943	586 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	SNP1	Q00916	300 aa	Predicted RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	SPR6	Q01684	191 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	EMI1	Q04406	187 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YOL131W	Q08270	108 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YOR365C	Q08844	703 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	YPL225W	Q08971	146 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	SFM1	Q12314	213 aa		3.73	□□□□□ -1.81
LOS1	YKL205W	RRP12	Q12754	1228 aa	Known RBP	3.73	□□□□□ -1.81
LOS1	YKL205W	YAK1	P14680	807 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	SKN1	P33336	771 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	AST1	P35183	429 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	NTR2	P36118	322 aa	Predicted RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	YBR238C	P38330	731 aa	Known RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	SCS2	P40075	244 aa	Known RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	MPM1	P40364	252 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	HOC1	P47124	396 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	SLU7	Q02775	382 aa	Known RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	RRN5	Q02983	363 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	MUM3	Q08750	479 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	YPR202W	Q08993	238 aa		3.72	□□□□□ -1.81
LOS1	YKL205W	YPL245W	Q12179	454 aa	Known RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	DPM1	P14020	267 aa	Known RBP	3.72	□□□□□ -1.81
LOS1	YKL205W	NSP1	P14907	823 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms