RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W RRB1Q04225 511 aaKnown RBP3.2□□□□□ -1.9
VMA5YKL080W UAF30Q08747 228 aa3.2□□□□□ -1.9
VMA5YKL080W TFB5Q3E7C1 72 aaPredicted RBP3.2□□□□□ -1.9
VMA5YKL080W YML133CQ03099 1374 aa3.2□□□□□ -1.9
VMA5YKL080W YLL067CQ07888 1374 aa3.2□□□□□ -1.9
VMA5YKL080W YLL066CQ99208 1374 aa3.2□□□□□ -1.9
VMA5YKL080W ARG81P05085 880 aa3.19□□□□□ -1.9
VMA5YKL080W GLN3P18494 730 aa3.19□□□□□ -1.9
VMA5YKL080W MCM4P30665 933 aaKnown RBP3.19□□□□□ -1.9
VMA5YKL080W NDI1P32340 513 aa3.19□□□□□ -1.9
VMA5YKL080W HXT3P32466 567 aaKnown RBP3.19□□□□□ -1.9
VMA5YKL080W YBL055CP34220 418 aaPredicted RBP3.19□□□□□ -1.9
VMA5YKL080W TUL1P36096 758 aa3.19□□□□□ -1.9
VMA5YKL080W NUP133P36161 1157 aa3.19□□□□□ -1.9
VMA5YKL080W RIM2P38127 377 aa3.19□□□□□ -1.9
VMA5YKL080W YBL028CP38202 106 aa3.19□□□□□ -1.9
VMA5YKL080W MMS4P38257 691 aa3.19□□□□□ -1.9
VMA5YKL080W SIF2P38262 535 aa3.19□□□□□ -1.9
VMA5YKL080W DBP8P38719 431 aa3.19□□□□□ -1.9
VMA5YKL080W CHS6P40955 746 aa3.19□□□□□ -1.9
VMA5YKL080W FET5P43561 622 aa3.19□□□□□ -1.9
VMA5YKL080W EPL1P43572 832 aa3.19□□□□□ -1.9
VMA5YKL080W RMD9P53140 646 aaKnown RBP3.19□□□□□ -1.9
VMA5YKL080W YMR130WQ04223 302 aa3.19□□□□□ -1.9
VMA5YKL080W VTI1Q04338 217 aa3.19□□□□□ -1.9
VMA5YKL080W RTT103Q05543 409 aa3.19□□□□□ -1.9
VMA5YKL080W HEL2Q05580 639 aaKnown RBP3.19□□□□□ -1.9
VMA5YKL080W YLR456WQ06199 204 aa3.19□□□□□ -1.9
VMA5YKL080W MMR1Q06324 491 aa3.19□□□□□ -1.9
VMA5YKL080W BUG1Q12191 341 aa3.19□□□□□ -1.9
VMA5YKL080W RUP1Q12242 671 aa3.19□□□□□ -1.9
VMA5YKL080W ISN1Q99312 450 aa3.19□□□□□ -1.9
VMA5YKL080W PRP2P20095 876 aaPredicted RBP3.18□□□□□ -1.9
VMA5YKL080W PRO3P32263 286 aaKnown RBP3.18□□□□□ -1.9
VMA5YKL080W AFG1P32317 509 aa3.18□□□□□ -1.9
VMA5YKL080W SRB2P34162 210 aa3.18□□□□□ -1.9
VMA5YKL080W RPL32P38061 130 aaKnown RBP3.18□□□□□ -1.9
VMA5YKL080W ARA1P38115 344 aa3.18□□□□□ -1.9
VMA5YKL080W ERG7P38604 731 aa3.18□□□□□ -1.9
VMA5YKL080W SPT8P38915 602 aa3.18□□□□□ -1.9
VMA5YKL080W YTA12P40341 825 aa3.18□□□□□ -1.9
VMA5YKL080W YJL070CP40361 888 aa3.18□□□□□ -1.9
VMA5YKL080W EFM4P40516 257 aa3.18□□□□□ -1.9
VMA5YKL080W YJL132WP47014 750 aa3.18□□□□□ -1.9
VMA5YKL080W TOM22P49334 152 aa3.18□□□□□ -1.9
VMA5YKL080W PKP2P53170 491 aa3.18□□□□□ -1.9
VMA5YKL080W NUP100Q02629 959 aa3.18□□□□□ -1.9
VMA5YKL080W ACL4Q03771 387 aa3.18□□□□□ -1.9
VMA5YKL080W EMI2Q04409 500 aaKnown RBP3.18□□□□□ -1.9
VMA5YKL080W RBS1Q05672 457 aaKnown RBP3.18□□□□□ -1.9
VMA5YKL080W DBP9Q06218 594 aaKnown RBP3.18□□□□□ -1.9
VMA5YKL080W KEL3Q08979 651 aaPredicted RBP3.18□□□□□ -1.9
VMA5YKL080W DAP1Q12091 152 aa3.18□□□□□ -1.9
VMA5YKL080W ATG9Q12142 997 aa3.18□□□□□ -1.9
VMA5YKL080W SRN2Q99176 213 aa3.18□□□□□ -1.9
VMA5YKL080W MRP13P12686 339 aa3.17□□□□□ -1.9
VMA5YKL080W TAL1P15019 335 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W GID7P25569 745 aa3.17□□□□□ -1.9
VMA5YKL080W NIP1P32497 812 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W SHP1P34223 423 aa3.17□□□□□ -1.9
VMA5YKL080W MIA40P36046 403 aa3.17□□□□□ -1.9
VMA5YKL080W MRPL4P36517 319 aa3.17□□□□□ -1.9
VMA5YKL080W OLA1P38219 394 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W ANS1P38832 159 aa3.17□□□□□ -1.9
VMA5YKL080W VPS45P38932 577 aa3.17□□□□□ -1.9
VMA5YKL080W DHH1P39517 506 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W RTT105P40063 208 aa3.17□□□□□ -1.9
VMA5YKL080W YIR014WP40570 242 aa3.17□□□□□ -1.9
VMA5YKL080W MKT1P40850 830 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W RPA34P47006 233 aaPredicted RBP3.17□□□□□ -1.9
VMA5YKL080W EGD1Q02642 157 aaKnown RBP3.17□□□□□ -1.9
VMA5YKL080W TAP42Q04372 366 aa3.17□□□□□ -1.9
VMA5YKL080W YLH47Q06493 454 aa3.17□□□□□ -1.9
VMA5YKL080W NDL1Q06568 189 aa3.17□□□□□ -1.9
VMA5YKL080W TEN1Q07921 160 aa3.17□□□□□ -1.9
VMA5YKL080W RDR1Q08904 546 aa3.17□□□□□ -1.9
VMA5YKL080W MTR10Q99189 972 aa3.17□□□□□ -1.9
VMA5YKL080W TY1B-AO13527 1196 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W PDE2P06776 526 aa3.16□□□□□ -1.9
VMA5YKL080W URA4P20051 364 aa3.16□□□□□ -1.9
VMA5YKL080W CLN1P20437 546 aa3.16□□□□□ -1.9
VMA5YKL080W KGD1P20967 1014 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W GAC1P28006 793 aa3.16□□□□□ -1.9
VMA5YKL080W FAA1P30624 700 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W YHR131CP38835 850 aa3.16□□□□□ -1.9
VMA5YKL080W YDR089WP38966 869 aa3.16□□□□□ -1.9
VMA5YKL080W YER130CP39959 443 aa3.16□□□□□ -1.9
VMA5YKL080W NAS2P40555 220 aa3.16□□□□□ -1.9
VMA5YKL080W ALT2P52892 507 aa3.16□□□□□ -1.9
VMA5YKL080W YGR126WP53274 230 aa3.16□□□□□ -1.9
VMA5YKL080W PDR16P53860 351 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W ERV25P54837 211 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
VMA5YKL080W RBA50Q04418 439 aa3.16□□□□□ -1.9
VMA5YKL080W ECM30Q06673 1274 aa3.16□□□□□ -1.9
VMA5YKL080W RLP24Q07915 199 aaKnown RBP3.16□□□□□ -1.9
VMA5YKL080W PSY3Q12318 242 aa3.16□□□□□ -1.9
VMA5YKL080W SGS1P35187 1447 aa3.16□□□□□ -1.9
VMA5YKL080W PUT2P07275 575 aa3.15□□□□□ -1.91
VMA5YKL080W LPD1P09624 499 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms