RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W KDX1P36005 433 aa2.26□□□□□ -2.05
NUP100YKL068W STV1P37296 890 aa2.26□□□□□ -2.05
NUP100YKL068W TOM71P38825 639 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W SHQ1P40486 507 aaPredicted RBP2.26□□□□□ -2.05
NUP100YKL068W YGR079WP53249 370 aa2.26□□□□□ -2.05
NUP100YKL068W CAF130P53280 1122 aaPredicted RBP2.26□□□□□ -2.05
NUP100YKL068W OCA2P53949 197 aa2.26□□□□□ -2.05
NUP100YKL068W BOP3P53958 396 aa2.26□□□□□ -2.05
NUP100YKL068W ARR2Q06597 130 aa2.26□□□□□ -2.05
NUP100YKL068W YFH1Q07540 174 aa2.26□□□□□ -2.05
NUP100YKL068W HRP1Q99383 534 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W SAM1P10659 382 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W GAL3P13045 520 aa2.25□□□□□ -2.05
NUP100YKL068W OSM1P21375 501 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W MGR1P25573 417 aa2.25□□□□□ -2.05
NUP100YKL068W LRE1P25579 583 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W YCL068CP25593 260 aa2.25□□□□□ -2.05
NUP100YKL068W ITR1P30605 584 aa2.25□□□□□ -2.05
NUP100YKL068W DCG1P32460 244 aa2.25□□□□□ -2.05
NUP100YKL068W SRB4P32569 687 aa2.25□□□□□ -2.05
NUP100YKL068W SPR1P32603 445 aa2.25□□□□□ -2.05
NUP100YKL068W RRP1P35178 278 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W YKR015CP36111 568 aa2.25□□□□□ -2.05
NUP100YKL068W APT2P36973 181 aa2.25□□□□□ -2.05
NUP100YKL068W MCX1P38323 520 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W SWC5P38326 303 aa2.25□□□□□ -2.05
NUP100YKL068W PCA1P38360 1216 aa2.25□□□□□ -2.05
NUP100YKL068W LEU5P38702 357 aa2.25□□□□□ -2.05
NUP100YKL068W STN1P38960 494 aa2.25□□□□□ -2.05
NUP100YKL068W YJL193WP39542 402 aa2.25□□□□□ -2.05
NUP100YKL068W CIN1P40987 1014 aa2.25□□□□□ -2.05
NUP100YKL068W SWP82P43554 623 aa2.25□□□□□ -2.05
NUP100YKL068W STB2P46679 850 aa2.25□□□□□ -2.05
NUP100YKL068W GTO1P48239 356 aa2.25□□□□□ -2.05
NUP100YKL068W BIO3P50277 480 aa2.25□□□□□ -2.05
NUP100YKL068W RTT102P53330 157 aa2.25□□□□□ -2.05
NUP100YKL068W ASI2P53895 289 aa2.25□□□□□ -2.05
NUP100YKL068W IGO1P53897 168 aa2.25□□□□□ -2.05
NUP100YKL068W PGA2P53903 129 aa2.25□□□□□ -2.05
NUP100YKL068W SKO1Q02100 647 aa2.25□□□□□ -2.05
NUP100YKL068W HMO1Q03973 246 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W UBX2Q04228 584 aa2.25□□□□□ -2.05
NUP100YKL068W RRP45Q05636 305 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W CRN1Q06440 651 aa2.25□□□□□ -2.05
NUP100YKL068W MCM21Q06675 368 aa2.25□□□□□ -2.05
NUP100YKL068W YOR352WQ08816 343 aa2.25□□□□□ -2.05
NUP100YKL068W MF(ALPHA)1P01149 165 aa2.25□□□□□ -2.05
NUP100YKL068W AI1P03875 834 aa2.25□□□□□ -2.05
NUP100YKL068W SSA3P09435 649 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W KSS1P14681 368 aa2.25□□□□□ -2.05
NUP100YKL068W APA2P22108 325 aa2.25□□□□□ -2.05
NUP100YKL068W YCR015CP25616 317 aa2.25□□□□□ -2.05
NUP100YKL068W CDC15P27636 974 aa2.25□□□□□ -2.05
NUP100YKL068W MVD1P32377 396 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W ARO4P32449 370 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W ARO9P38840 513 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W LOC1P43586 204 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W AIM22P47051 409 aa2.25□□□□□ -2.05
NUP100YKL068W RIB4P50861 169 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W COP1P53622 1201 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W DBP6P53734 629 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W YNL247WP53852 767 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W ORC3P54790 616 aa2.25□□□□□ -2.05
NUP100YKL068W SPO19Q03029 223 aa2.25□□□□□ -2.05
NUP100YKL068W MRPS17Q03246 237 aaPredicted RBP2.25□□□□□ -2.05
NUP100YKL068W DCS1Q06151 350 aa2.25□□□□□ -2.05
NUP100YKL068W ARR3Q06598 404 aa2.25□□□□□ -2.05
NUP100YKL068W DIS3Q08162 1001 aaKnown RBP2.25□□□□□ -2.05
NUP100YKL068W YLR415CO13578 112 aa2.24□□□□□ -2.05
NUP100YKL068W CHO2P05374 869 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W SPE1P08432 466 aa2.24□□□□□ -2.05
NUP100YKL068W KIN2P13186 1147 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W STE11P23561 717 aa2.24□□□□□ -2.05
NUP100YKL068W PET18P25362 215 aa2.24□□□□□ -2.05
NUP100YKL068W GID7P25569 745 aa2.24□□□□□ -2.05
NUP100YKL068W RDS1P25611 832 aa2.24□□□□□ -2.05
NUP100YKL068W RIM1P32445 135 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W PDB1P32473 366 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W EMP70P32802 667 aa2.24□□□□□ -2.05
NUP100YKL068W SKN7P38889 622 aa2.24□□□□□ -2.05
NUP100YKL068W BNA6P43619 295 aa2.24□□□□□ -2.05
NUP100YKL068W ROG1P53118 685 aa2.24□□□□□ -2.05
NUP100YKL068W YAT1P80235 687 aa2.24□□□□□ -2.05
NUP100YKL068W RSN1Q03516 953 aa2.24□□□□□ -2.05
NUP100YKL068W EKI1Q03764 534 aa2.24□□□□□ -2.05
NUP100YKL068W CAB5Q03941 241 aa2.24□□□□□ -2.05
NUP100YKL068W RRB1Q04225 511 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W YLR455WQ06188 304 aa2.24□□□□□ -2.05
NUP100YKL068W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
NUP100YKL068W NTO1Q12311 748 aa2.24□□□□□ -2.05
NUP100YKL068W MED4Q12343 284 aa2.24□□□□□ -2.05
NUP100YKL068W DFG16Q99234 619 aa2.24□□□□□ -2.05
NUP100YKL068W SSK22P25390 1331 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W ARG81P05085 880 aa2.24□□□□□ -2.05
NUP100YKL068W LEU4P06208 619 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W MEK1P24719 497 aaPredicted RBP2.24□□□□□ -2.05
NUP100YKL068W GAR1P28007 205 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W PRO3P32263 286 aaKnown RBP2.24□□□□□ -2.05
NUP100YKL068W HXT1P32465 570 aa2.24□□□□□ -2.05
NUP100YKL068W SIP1P32578 815 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms