RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR040C	YIR040C	AME1	P38313	324 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	SWC5	P38326	303 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	SSH1	P38353	490 aa	Known RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	PCL5	P38794	229 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	UME6	P39001	836 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	CCT6	P39079	546 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	FRT2	P39734	528 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	MGS1	P40151	587 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	YMR134W	P40207	237 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	RFC4	P40339	323 aa	Known RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	IMA5	P40884	581 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	GAB1	P41733	394 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	THI6	P41835	540 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	OTU1	P43558	301 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	NPA3	P47122	385 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	PSP1	P50896	841 aa	Known RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	YGR117C	P53270	476 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	RCF2	P53721	224 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	IMP4	P53941	290 aa	Known RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	DIA1	P54005	336 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	MFM1	Q02783	413 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	SLD5	Q03406	294 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	EBS1	Q03466	884 aa	Known RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	PDS5	Q04264	1277 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	CSI1	Q04368	295 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	RCO1	Q04779	684 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	MFB1	Q04922	465 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	COX20	Q04935	205 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	VID22	Q05934	901 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	ECM30	Q06673	1274 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	THI3	Q07471	609 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	YAP7	Q08182	245 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	GPN2	Q08726	347 aa	Predicted RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	YTM1	Q12024	460 aa	Predicted RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	HFI1	Q12060	488 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	MRPL23	Q12487	163 aa	Predicted RBP	3.2	□□□□□ -1.9
YIR040C	YIR040C	RMP1	Q12530	201 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	NBL1	Q3E7Y6	73 aa		3.2	□□□□□ -1.9
YIR040C	YIR040C	SPP41	P38904	1435 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	CDC8	P00572	216 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	RPL24A	P04449	155 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	CHO2	P05374	869 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	MET17	P06106	444 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	LEU4	P06208	619 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	TPK1	P06244	397 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	ARG80	P07249	177 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	MSS18	P08593	268 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	PCK1	P10963	549 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	CBS1	P14066	229 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	GCN3	P14741	305 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	NSP1	P14907	823 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	SEC18	P18759	758 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	SNF6	P18888	332 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	HOP1	P20050	605 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	SWI4	P25302	1093 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	YCR101C	P25607	182 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	IDH2	P28241	369 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YIR040C	YIR040C	CAM1	P29547	415 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	CCR4	P31384	837 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	PRX1	P34227	261 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	YKL071W	P36086	256 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	MRPL7	P36519	292 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	RIB5	P38145	238 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	RFT1	P38206	574 aa	Predicted RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	TAE1	P38340	232 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	SDH8	P38345	138 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	IMD2	P38697	523 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	SBE22	P38814	852 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	FMO1	P38866	432 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YIR040C	YIR040C	NPR2	P39923	615 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	AFG3	P39925	761 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	FMP52	P40008	231 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	MRX1	P40050	688 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	GID8	P40208	455 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	ALG8	P40351	577 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	CHS6	P40955	746 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	ERR3	P42222	437 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	QRI7	P43122	407 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	AGP3	P43548	558 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	SAD1	P43589	448 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	YJR056C	P47115	236 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	YJR141W	P47172	347 aa	Predicted RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	RPS7B	P48164	190 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	MET13	P53128	600 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	GET1	P53192	235 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	ZPR1	P53303	486 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	ADE16	P54113	591 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	TIM10	P87108	93 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	ACS1	Q01574	713 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	MRPL13	Q02204	264 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	UTP6	Q02354	440 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	MRP51	Q02950	344 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	MTQ2	Q03920	221 aa	Predicted RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	AIM32	Q04689	311 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	HCR1	Q05775	265 aa	Known RBP	3.19	□□□□□ -1.9
YIR040C	YIR040C	MSC3	Q05812	728 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	VTA1	Q06263	330 aa		3.19	□□□□□ -1.9
YIR040C	YIR040C	GPN3	Q06543	272 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms