RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C THP1Q08231 455 aa8.47□□□□□ -1.05
SSL2YIL143C SCD5P34758 872 aa8.46□□□□□ -1.05
SSL2YIL143C YHL026CP38740 315 aa8.46□□□□□ -1.05
SSL2YIL143C DOT6P40059 670 aaKnown RBP8.46□□□□□ -1.05
SSL2YIL143C ALR2P43553 858 aa8.46□□□□□ -1.05
SSL2YIL143C LSG1P53145 640 aaKnown RBP8.46□□□□□ -1.05
SSL2YIL143C YLL007CQ07799 665 aa8.46□□□□□ -1.05
SSL2YIL143C ACF2Q12168 779 aa8.46□□□□□ -1.05
SSL2YIL143C RAD59Q12223 238 aa8.46□□□□□ -1.05
SSL2YIL143C STB6P36085 766 aa8.46□□□□□ -1.06
SSL2YIL143C SIF2P38262 535 aa8.46□□□□□ -1.06
SSL2YIL143C IPI1P38803 334 aaPredicted RBP8.46□□□□□ -1.06
SSL2YIL143C KTR7P40504 517 aa8.46□□□□□ -1.06
SSL2YIL143C GAB1P41733 394 aa8.46□□□□□ -1.06
SSL2YIL143C COP1P53622 1201 aaKnown RBP8.46□□□□□ -1.06
SSL2YIL143C YLR345WQ06137 509 aa8.46□□□□□ -1.06
SSL2YIL143C MFG1Q07684 458 aa8.46□□□□□ -1.06
SSL2YIL143C SPT3P06844 337 aa8.45□□□□□ -1.06
SSL2YIL143C AAR2P32357 355 aaPredicted RBP8.45□□□□□ -1.06
SSL2YIL143C ADD66P36040 267 aa8.45□□□□□ -1.06
SSL2YIL143C POL12P38121 705 aaPredicted RBP8.45□□□□□ -1.06
SSL2YIL143C MTG2P38860 518 aa8.45□□□□□ -1.06
SSL2YIL143C MXR1P40029 184 aa8.45□□□□□ -1.06
SSL2YIL143C IST3P40565 148 aaPredicted RBP8.45□□□□□ -1.06
SSL2YIL143C YFL066CP43538 392 aa8.45□□□□□ -1.06
SSL2YIL143C SMA1Q02651 245 aa8.45□□□□□ -1.06
SSL2YIL143C ECM11Q04110 302 aa8.45□□□□□ -1.06
SSL2YIL143C DBP9Q06218 594 aaKnown RBP8.45□□□□□ -1.06
SSL2YIL143C YPS7Q06325 596 aa8.45□□□□□ -1.06
SSL2YIL143C SVS1Q12254 260 aa8.45□□□□□ -1.06
SSL2YIL143C YCL049CP25577 312 aa8.45□□□□□ -1.06
SSL2YIL143C GND1P38720 489 aaKnown RBP8.45□□□□□ -1.06
SSL2YIL143C LAS21P40367 830 aa8.45□□□□□ -1.06
SSL2YIL143C HXT16P47185 567 aa8.45□□□□□ -1.06
SSL2YIL143C PRM8P53174 237 aa8.45□□□□□ -1.06
SSL2YIL143C HRK1Q08732 759 aaKnown RBP8.45□□□□□ -1.06
SSL2YIL143C ATG29Q12092 213 aa8.45□□□□□ -1.06
SSL2YIL143C YDL199CQ12407 687 aa8.45□□□□□ -1.06
SSL2YIL143C STF2P16965 84 aa8.44□□□□□ -1.06
SSL2YIL143C YHR219WP38900 624 aa8.44□□□□□ -1.06
SSL2YIL143C RSP5P39940 809 aaKnown RBP8.44□□□□□ -1.06
SSL2YIL143C SER2P42941 309 aa8.44□□□□□ -1.06
SSL2YIL143C ARO8P53090 500 aaKnown RBP8.44□□□□□ -1.06
SSL2YIL143C ESC8Q08119 714 aa8.44□□□□□ -1.06
SSL2YIL143C YOL131WQ08270 108 aa8.44□□□□□ -1.06
SSL2YIL143C UBR1P19812 1950 aa8.44□□□□□ -1.06
SSL2YIL143C DBP1P24784 617 aaKnown RBP8.44□□□□□ -1.06
SSL2YIL143C YHR202WP38887 602 aa8.44□□□□□ -1.06
SSL2YIL143C NDE1P40215 560 aa8.44□□□□□ -1.06
SSL2YIL143C YJR098CP47139 656 aa8.44□□□□□ -1.06
SSL2YIL143C MET31Q03081 177 aa8.44□□□□□ -1.06
SSL2YIL143C YDR132CQ03900 495 aa8.44□□□□□ -1.06
SSL2YIL143C PEX27Q08580 376 aa8.44□□□□□ -1.06
SSL2YIL143C MCA1Q08601 432 aa8.44□□□□□ -1.06
SSL2YIL143C YBR298C-AQ8TGK4 73 aa8.44□□□□□ -1.06
SSL2YIL143C CTF13P35203 478 aa8.43□□□□□ -1.06
SSL2YIL143C MPT5P39016 859 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
SSL2YIL143C PAC11P40960 533 aa8.43□□□□□ -1.06
SSL2YIL143C CSN12P47130 423 aa8.43□□□□□ -1.06
SSL2YIL143C NQM1P53228 333 aaPredicted RBP8.43□□□□□ -1.06
SSL2YIL143C BRE5P53741 515 aaKnown RBP8.43□□□□□ -1.06
SSL2YIL143C NOG1Q02892 647 aaKnown RBP8.43□□□□□ -1.06
SSL2YIL143C SMF3Q12078 473 aaPredicted RBP8.43□□□□□ -1.06
SSL2YIL143C LCB4Q12246 624 aa8.43□□□□□ -1.06
SSL2YIL143C ATP4P05626 244 aa8.43□□□□□ -1.06
SSL2YIL143C CDC4P07834 779 aa8.43□□□□□ -1.06
SSL2YIL143C SEC2P17065 759 aa8.43□□□□□ -1.06
SSL2YIL143C MRPL9P31334 269 aa8.43□□□□□ -1.06
SSL2YIL143C VPH1P32563 840 aaKnown RBP8.43□□□□□ -1.06
SSL2YIL143C DSS4P32601 143 aa8.43□□□□□ -1.06
SSL2YIL143C ASH1P34233 588 aa8.43□□□□□ -1.06
SSL2YIL143C LDB7P38210 180 aa8.43□□□□□ -1.06
SSL2YIL143C AFG3P39925 761 aa8.43□□□□□ -1.06
SSL2YIL143C MPM1P40364 252 aa8.43□□□□□ -1.06
SSL2YIL143C BUD13P46947 266 aaPredicted RBP8.43□□□□□ -1.06
SSL2YIL143C IDP3P53982 420 aaKnown RBP8.43□□□□□ -1.06
SSL2YIL143C RRN5Q02983 363 aa8.43□□□□□ -1.06
SSL2YIL143C HBT1Q07653 1046 aaKnown RBP8.43□□□□□ -1.06
SSL2YIL143C ADE5,7P07244 802 aaKnown RBP8.42□□□□□ -1.06
SSL2YIL143C CAP2P13517 287 aa8.42□□□□□ -1.06
SSL2YIL143C SAR1P20606 190 aaKnown RBP8.42□□□□□ -1.06
SSL2YIL143C APN1P22936 367 aa8.42□□□□□ -1.06
SSL2YIL143C CHA1P25379 360 aaKnown RBP8.42□□□□□ -1.06
SSL2YIL143C PEX34P25584 144 aa8.42□□□□□ -1.06
SSL2YIL143C DUR3P33413 735 aa8.42□□□□□ -1.06
SSL2YIL143C PET100P38958 111 aa8.42□□□□□ -1.06
SSL2YIL143C DDI1P40087 428 aa8.42□□□□□ -1.06
SSL2YIL143C CAK1P43568 368 aaPredicted RBP8.42□□□□□ -1.06
SSL2YIL143C PET130P47065 347 aa8.42□□□□□ -1.06
SSL2YIL143C MRPL50P53724 139 aa8.42□□□□□ -1.06
SSL2YIL143C CLP1Q08685 445 aaPredicted RBP8.42□□□□□ -1.06
SSL2YIL143C PKH2Q12236 1081 aaKnown RBP8.42□□□□□ -1.06
SSL2YIL143C ASF2P32448 525 aaPredicted RBP8.42□□□□□ -1.06
SSL2YIL143C FMP23P38231 175 aa8.42□□□□□ -1.06
SSL2YIL143C YHR033WP38690 423 aa8.42□□□□□ -1.06
SSL2YIL143C YGR168CP53293 376 aa8.42□□□□□ -1.06
SSL2YIL143C YMD8Q03697 442 aa8.42□□□□□ -1.06
SSL2YIL143C SSL1Q04673 461 aaPredicted RBP8.42□□□□□ -1.06
SSL2YIL143C ECM22Q05958 814 aaPredicted RBP8.42□□□□□ -1.06
SSL2YIL143C RAD34Q06665 692 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms