RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W ROG1P53118 685 aa9.71□□□□□ -0.86
UBA4YHR111W REX4Q08237 289 aa9.71□□□□□ -0.86
UBA4YHR111W PUS9Q12069 462 aa9.71□□□□□ -0.86
UBA4YHR111W NOT5Q12514 560 aaPredicted RBP9.71□□□□□ -0.86
UBA4YHR111W Q0010Q9ZZX9 128 aa9.71□□□□□ -0.86
UBA4YHR111W CYR1P08678 2026 aaKnown RBP9.7□□□□□ -0.86
UBA4YHR111W TY2A-LR1P0C2J4 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-FP0CX61 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-GR2P0CX62 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-CP25383 438 aa9.7□□□□□ -0.86
UBA4YHR111W UGP1P32861 499 aaKnown RBP9.7□□□□□ -0.86
UBA4YHR111W SUI1P32911 108 aaKnown RBP9.7□□□□□ -0.86
UBA4YHR111W VPS21P36017 210 aaKnown RBP9.7□□□□□ -0.86
UBA4YHR111W YGR012WP53206 393 aa9.7□□□□□ -0.86
UBA4YHR111W PRP38Q00723 242 aaPredicted RBP9.7□□□□□ -0.86
UBA4YHR111W PEX25Q02969 394 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-DR2Q03483 438 aa9.7□□□□□ -0.86
UBA4YHR111W OMS1Q06668 471 aa9.7□□□□□ -0.86
UBA4YHR111W YOL159CQ08300 171 aa9.7□□□□□ -0.86
UBA4YHR111W YLL054CQ12244 843 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-BQ12260 438 aa9.7□□□□□ -0.86
UBA4YHR111W ATG34Q12292 412 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-OR2Q12293 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-DR1Q12392 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-OR1Q12439 438 aa9.7□□□□□ -0.86
UBA4YHR111W TY2A-DR3Q99303 438 aa9.7□□□□□ -0.86
UBA4YHR111W BAS1P22035 811 aa9.69□□□□□ -0.86
UBA4YHR111W TAH1P25638 111 aaPredicted RBP9.69□□□□□ -0.86
UBA4YHR111W CAB3P36076 571 aa9.69□□□□□ -0.86
UBA4YHR111W YCR087C-AP37263 153 aa9.69□□□□□ -0.86
UBA4YHR111W RPL10P41805 221 aaKnown RBP9.69□□□□□ -0.86
UBA4YHR111W MEP2P41948 499 aa9.69□□□□□ -0.86
UBA4YHR111W PDR8Q06149 701 aa9.69□□□□□ -0.86
UBA4YHR111W GLO4Q12320 285 aa9.69□□□□□ -0.86
UBA4YHR111W YPR064WQ12492 139 aa9.69□□□□□ -0.86
UBA4YHR111W DBR1P24309 405 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W LDB16P25587 256 aa9.68□□□□□ -0.86
UBA4YHR111W CDC12P32468 407 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W KAP122P32767 1081 aa9.68□□□□□ -0.86
UBA4YHR111W OAR1P35731 278 aa9.68□□□□□ -0.86
UBA4YHR111W OMA1P36163 345 aa9.68□□□□□ -0.86
UBA4YHR111W CTP1P38152 299 aa9.68□□□□□ -0.86
UBA4YHR111W YEN1P40028 759 aa9.68□□□□□ -0.86
UBA4YHR111W TDA10P42938 290 aa9.68□□□□□ -0.86
UBA4YHR111W PRM10P42946 383 aa9.68□□□□□ -0.86
UBA4YHR111W BIO3P50277 480 aa9.68□□□□□ -0.86
UBA4YHR111W YNL010WP53981 241 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W ERG13P54839 491 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W TPP1Q03796 238 aa9.68□□□□□ -0.86
UBA4YHR111W ESA1Q08649 445 aa9.68□□□□□ -0.86
UBA4YHR111W NOP58Q12499 511 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W FAS1P07149 2051 aaKnown RBP9.68□□□□□ -0.86
UBA4YHR111W PRT1P06103 763 aaKnown RBP9.67□□□□□ -0.86
UBA4YHR111W COR1P07256 457 aa9.67□□□□□ -0.86
UBA4YHR111W HOM3P10869 527 aa9.67□□□□□ -0.86
UBA4YHR111W RPC19P28000 142 aaKnown RBP9.67□□□□□ -0.86
UBA4YHR111W YMC1P32331 307 aa9.67□□□□□ -0.86
UBA4YHR111W YBR062CP38239 180 aa9.67□□□□□ -0.86
UBA4YHR111W ATG7P38862 630 aa9.67□□□□□ -0.86
UBA4YHR111W UBP6P43593 499 aaKnown RBP9.67□□□□□ -0.86
UBA4YHR111W JHD2P47156 728 aaPredicted RBP9.67□□□□□ -0.86
UBA4YHR111W NAS6P50086 228 aa9.67□□□□□ -0.86
UBA4YHR111W MRM2P53123 320 aa9.67□□□□□ -0.86
UBA4YHR111W ELP4Q02884 456 aaKnown RBP9.67□□□□□ -0.86
UBA4YHR111W APC4Q04601 652 aa9.67□□□□□ -0.86
UBA4YHR111W YDR124WQ04608 324 aa9.67□□□□□ -0.86
UBA4YHR111W YDR338CQ05497 695 aa9.67□□□□□ -0.86
UBA4YHR111W MCA1Q08601 432 aa9.67□□□□□ -0.86
UBA4YHR111W GCN1P33892 2672 aaKnown RBP9.67□□□□□ -0.86
UBA4YHR111W KAR1P11927 433 aa9.66□□□□□ -0.86
UBA4YHR111W MXR2P25566 168 aa9.66□□□□□ -0.86
UBA4YHR111W LOS1P33418 1100 aaPredicted RBP9.66□□□□□ -0.86
UBA4YHR111W RPS27AP35997 82 aaKnown RBP9.66□□□□□ -0.86
UBA4YHR111W CAF4P36130 643 aa9.66□□□□□ -0.86
UBA4YHR111W HSM3P38348 480 aa9.66□□□□□ -0.86
UBA4YHR111W RPS27BP38711 82 aa9.66□□□□□ -0.86
UBA4YHR111W PRP39P39682 629 aaKnown RBP9.66□□□□□ -0.86
UBA4YHR111W YIL152WP40455 235 aa9.66□□□□□ -0.86
UBA4YHR111W AIM22P47051 409 aa9.66□□□□□ -0.86
UBA4YHR111W CUS2P53830 285 aaPredicted RBP9.66□□□□□ -0.86
UBA4YHR111W IRC15Q02733 499 aa9.66□□□□□ -0.86
UBA4YHR111W YPL066WQ12194 479 aa9.66□□□□□ -0.86
UBA4YHR111W WSC3Q12215 556 aa9.66□□□□□ -0.86
UBA4YHR111W HSP42Q12329 375 aa9.66□□□□□ -0.86
UBA4YHR111W PRP8P33334 2413 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W RPS17AP02407 136 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W RPS17BP14127 136 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W IDH2P28241 369 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W SSH4P32343 579 aa9.65□□□□□ -0.86
UBA4YHR111W MKK2P32491 506 aa9.65□□□□□ -0.86
UBA4YHR111W NIP1P32497 812 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W BNA4P38169 460 aa9.65□□□□□ -0.86
UBA4YHR111W VNX1P42839 908 aa9.65□□□□□ -0.86
UBA4YHR111W FMP32P43557 207 aa9.65□□□□□ -0.86
UBA4YHR111W PTR3P43606 678 aa9.65□□□□□ -0.86
UBA4YHR111W GTO1P48239 356 aa9.65□□□□□ -0.86
UBA4YHR111W RAD17P48581 401 aa9.65□□□□□ -0.86
UBA4YHR111W IDP3P53982 420 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W REX2P54964 269 aaKnown RBP9.65□□□□□ -0.86
UBA4YHR111W ECM11Q04110 302 aa9.65□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms