RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W LYS2P07702 1392 aa2.39□□□□□ -2.03
TRA1YHR099W NHP2P32495 156 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W ERG7P38604 731 aa2.39□□□□□ -2.03
TRA1YHR099W HPM1P40481 377 aa2.39□□□□□ -2.03
TRA1YHR099W POP1P41812 875 aa2.39□□□□□ -2.03
TRA1YHR099W HXT14P42833 540 aa2.39□□□□□ -2.03
TRA1YHR099W MRH4P53166 561 aa2.39□□□□□ -2.03
TRA1YHR099W YKR005CQ02203 525 aa2.39□□□□□ -2.03
TRA1YHR099W CTF19Q02732 369 aa2.39□□□□□ -2.03
TRA1YHR099W BCH1Q05029 724 aa2.39□□□□□ -2.03
TRA1YHR099W FYV7Q12247 151 aa2.39□□□□□ -2.03
TRA1YHR099W CBP2P03874 630 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W CIT2P08679 460 aa2.39□□□□□ -2.03
TRA1YHR099W TAE1P38340 232 aa2.39□□□□□ -2.03
TRA1YHR099W PTI1P39927 425 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W MRX5P47007 382 aa2.39□□□□□ -2.03
TRA1YHR099W YGR039WP53225 103 aa2.39□□□□□ -2.03
TRA1YHR099W ADE16P54113 591 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W YMR018WQ04364 514 aa2.39□□□□□ -2.03
TRA1YHR099W SPC2Q04969 178 aa2.39□□□□□ -2.03
TRA1YHR099W NEJ1Q06148 342 aa2.39□□□□□ -2.03
TRA1YHR099W HXK2P04807 486 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W HOP1P20050 605 aa2.39□□□□□ -2.03
TRA1YHR099W GLN1P32288 370 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W SUR1P33300 382 aa2.39□□□□□ -2.03
TRA1YHR099W BMH2P34730 273 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W CBP4P37267 147 aa2.39□□□□□ -2.03
TRA1YHR099W GRX7P38068 203 aa2.39□□□□□ -2.03
TRA1YHR099W PEX28P38848 579 aa2.39□□□□□ -2.03
TRA1YHR099W GDH3P39708 457 aa2.39□□□□□ -2.03
TRA1YHR099W YAL037WP39728 267 aa2.39□□□□□ -2.03
TRA1YHR099W OSW5P40219 148 aa2.39□□□□□ -2.03
TRA1YHR099W DLS1P40366 167 aa2.39□□□□□ -2.03
TRA1YHR099W GZF3P42944 551 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W VAC7P53950 1165 aa2.39□□□□□ -2.03
TRA1YHR099W GCR2Q01722 534 aa2.39□□□□□ -2.03
TRA1YHR099W SWP1Q02795 286 aa2.39□□□□□ -2.03
TRA1YHR099W SSL1Q04673 461 aaPredicted RBP2.39□□□□□ -2.03
TRA1YHR099W DAS2Q12084 232 aa2.39□□□□□ -2.03
TRA1YHR099W SNF6P18888 332 aa2.39□□□□□ -2.03
TRA1YHR099W WHI3P34761 661 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W SNU114P36048 1008 aaKnown RBP2.39□□□□□ -2.03
TRA1YHR099W SPL2P38839 148 aa2.39□□□□□ -2.03
TRA1YHR099W SHU2P38957 223 aa2.39□□□□□ -2.03
TRA1YHR099W PCL6P40038 420 aa2.39□□□□□ -2.03
TRA1YHR099W VHR2P40041 505 aa2.39□□□□□ -2.03
TRA1YHR099W YIP1P53039 248 aa2.39□□□□□ -2.03
TRA1YHR099W NUP49Q02199 472 aa2.39□□□□□ -2.03
TRA1YHR099W WAR1Q03631 944 aa2.39□□□□□ -2.03
TRA1YHR099W TRS23Q03784 219 aa2.39□□□□□ -2.03
TRA1YHR099W GIM5Q04493 163 aa2.39□□□□□ -2.03
TRA1YHR099W CDC73Q06697 393 aa2.39□□□□□ -2.03
TRA1YHR099W YOR238WQ08634 303 aa2.39□□□□□ -2.03
TRA1YHR099W SPT3P06844 337 aa2.38□□□□□ -2.03
TRA1YHR099W HEM1P09950 548 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W HOG1P32485 435 aa2.38□□□□□ -2.03
TRA1YHR099W PET127P32606 800 aa2.38□□□□□ -2.03
TRA1YHR099W MDL2P33311 773 aa2.38□□□□□ -2.03
TRA1YHR099W PAN3P36102 679 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W RIB5P38145 238 aa2.38□□□□□ -2.03
TRA1YHR099W YBR238CP38330 731 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W YEL075CP39972 122 aa2.38□□□□□ -2.03
TRA1YHR099W PPT1P53043 513 aa2.38□□□□□ -2.03
TRA1YHR099W DMA2P53924 522 aa2.38□□□□□ -2.03
TRA1YHR099W ERG5P54781 538 aa2.38□□□□□ -2.03
TRA1YHR099W CAB5Q03941 241 aa2.38□□□□□ -2.03
TRA1YHR099W YDR109CQ04585 715 aa2.38□□□□□ -2.03
TRA1YHR099W ISR1Q06098 443 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W YOL029CQ08187 201 aa2.38□□□□□ -2.03
TRA1YHR099W AVO1Q08236 1176 aa2.38□□□□□ -2.03
TRA1YHR099W ATP2P00830 511 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W CHS2P14180 963 aa2.38□□□□□ -2.03
TRA1YHR099W SEO1P39709 593 aa2.38□□□□□ -2.03
TRA1YHR099W BOL3P39724 118 aa2.38□□□□□ -2.03
TRA1YHR099W HXT8P40886 569 aa2.38□□□□□ -2.03
TRA1YHR099W AIP1P46680 615 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W ERO1Q03103 563 aa2.38□□□□□ -2.03
TRA1YHR099W MRPS17Q03246 237 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W HNT1Q04344 158 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W DUS3Q06053 668 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W SSK1Q07084 712 aa2.38□□□□□ -2.03
TRA1YHR099W YDL206WQ12424 762 aa2.38□□□□□ -2.03
TRA1YHR099W AHA1Q12449 350 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W YOL159C-AQ3E769 90 aa2.38□□□□□ -2.03
TRA1YHR099W FAS2P19097 1887 aaKnown RBP2.38□□□□□ -2.03
TRA1YHR099W SET3P36124 751 aa2.38□□□□□ -2.03
TRA1YHR099W YEA4P40004 342 aa2.38□□□□□ -2.03
TRA1YHR099W MXR1P40029 184 aa2.38□□□□□ -2.03
TRA1YHR099W CIT3P43635 486 aa2.38□□□□□ -2.03
TRA1YHR099W YJR141WP47172 347 aaPredicted RBP2.38□□□□□ -2.03
TRA1YHR099W RIM21P48565 533 aa2.38□□□□□ -2.03
TRA1YHR099W YGR016WP53209 190 aa2.38□□□□□ -2.03
TRA1YHR099W HAL9Q12180 1030 aa2.38□□□□□ -2.03
TRA1YHR099W YOR111WQ99210 232 aa2.38□□□□□ -2.03
TRA1YHR099W SNT2P53127 1403 aa2.38□□□□□ -2.03
TRA1YHR099W HIP1P06775 603 aa2.38□□□□□ -2.03
TRA1YHR099W MET3P08536 511 aa2.38□□□□□ -2.03
TRA1YHR099W PHO85P17157 305 aa2.38□□□□□ -2.03
TRA1YHR099W COQ1P18900 473 aa2.38□□□□□ -2.03
TRA1YHR099W PET18P25362 215 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms