RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A YMR018WQ04364 514 aa2.1□□□□□ -2.07
YHL009W-AYHL009W-A VPS38Q05919 439 aa2.1□□□□□ -2.07
YHL009W-AYHL009W-A SAM1P10659 382 aaKnown RBP2.09□□□□□ -2.07
YHL009W-AYHL009W-A HSP26P15992 214 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
YHL009W-AYHL009W-A SAM2P19358 384 aaKnown RBP2.09□□□□□ -2.07
YHL009W-AYHL009W-A PRD1P25375 712 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A MFT1P33441 392 aaKnown RBP2.09□□□□□ -2.07
YHL009W-AYHL009W-A POP1P41812 875 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A VID30P53076 958 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A CAF130P53280 1122 aaPredicted RBP2.09□□□□□ -2.07
YHL009W-AYHL009W-A OPY2Q06810 360 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
YHL009W-AYHL009W-A YDR056CQ12025 205 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A YLR108CQ12259 485 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A YJR112W-AQ3E743 109 aa2.09□□□□□ -2.07
YHL009W-AYHL009W-A CCH1P50077 2039 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A RPS8AP0CX39 200 aaKnown RBP2.08□□□□□ -2.08
YHL009W-AYHL009W-A RPS8BP0CX40 200 aaKnown RBP2.08□□□□□ -2.08
YHL009W-AYHL009W-A AAC3P18238 307 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A PAP1P29468 568 aaKnown RBP2.08□□□□□ -2.08
YHL009W-AYHL009W-A RSM22P36056 628 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A MUM2P38236 366 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A ERP2P39704 215 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A UPF3P48412 387 aaKnown RBP2.08□□□□□ -2.08
YHL009W-AYHL009W-A HXT11P54862 567 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A PEX25Q02969 394 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A YBL111CQ3E7Y5 667 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A BI3Q9ZZW7 517 aa2.08□□□□□ -2.08
YHL009W-AYHL009W-A DAL2P25335 343 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A ITR1P30605 584 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A MIX23P38162 196 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A YBR137WP38276 179 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A PAN6P40459 309 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A WWM1P43582 211 aaKnown RBP2.07□□□□□ -2.08
YHL009W-AYHL009W-A RTS3P53289 263 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A RSN1Q03516 953 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A AVL9Q12500 764 aa2.07□□□□□ -2.08
YHL009W-AYHL009W-A SEC53P07283 254 aaKnown RBP2.06□□□□□ -2.08
YHL009W-AYHL009W-A HSC82P15108 705 aaKnown RBP2.06□□□□□ -2.08
YHL009W-AYHL009W-A SSH4P32343 579 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A THI2P38141 450 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A MSG5P38590 489 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A YEL057CP39983 233 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A DOT5P40553 215 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A PET130P47065 347 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A ODC1Q03028 310 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A TAP42Q04372 366 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A CTI6Q08923 506 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A YPL199CQ08954 240 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A YDL007C-AQ2V2Q0 85 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A RAV1P47104 1357 aa2.06□□□□□ -2.08
YHL009W-AYHL009W-A RPL31BP0C2H9 113 aaKnown RBP2.05□□□□□ -2.08
YHL009W-AYHL009W-A CBS1P14066 229 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A OLE1P21147 510 aaKnown RBP2.05□□□□□ -2.08
YHL009W-AYHL009W-A PEP3P27801 918 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A REG2P38232 338 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A PRM5P40476 318 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A SSU1P41930 458 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A NCA3P46955 337 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A OGG1P53397 376 aaPredicted RBP2.05□□□□□ -2.08
YHL009W-AYHL009W-A FIN1Q03898 291 aa2.05□□□□□ -2.08
YHL009W-AYHL009W-A SEM1O94742 89 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A LEU4P06208 619 aaKnown RBP2.04□□□□□ -2.08
YHL009W-AYHL009W-A ATP10P18496 279 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A MRE11P32829 692 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A YCR041WP37265 110 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A YHR131CP38835 850 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A NOP16P40007 231 aaKnown RBP2.04□□□□□ -2.08
YHL009W-AYHL009W-A VID27P40157 782 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A OCA1P50946 238 aaPredicted RBP2.04□□□□□ -2.08
YHL009W-AYHL009W-A MTM1P53320 366 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A VPS75P53853 264 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A PDS5Q04264 1277 aa2.04□□□□□ -2.08
YHL009W-AYHL009W-A YAR066WP0CX18 203 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A YHR214WP0CX19 203 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A STB6P36085 766 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A RIB5P38145 238 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A BMT2P38278 337 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A MET28P40573 187 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A YGL108CP53139 140 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A PCP1P53259 346 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A ARE2P53629 642 aaKnown RBP2.03□□□□□ -2.08
YHL009W-AYHL009W-A IBD2P53892 351 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A PNG1Q02890 363 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A SVL3Q03088 825 aaKnown RBP2.03□□□□□ -2.08
YHL009W-AYHL009W-A YDR239CQ03780 787 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A RCN2Q12044 265 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A YPR022CQ12139 1133 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A ENT1Q12518 454 aa2.03□□□□□ -2.08
YHL009W-AYHL009W-A FOB1O13329 566 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A NFT1P0CE68 1218 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A VID24P38263 362 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A YBR225WP38321 900 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A MST28P39552 234 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A VMA13P41807 478 aaKnown RBP2.02□□□□□ -2.09
YHL009W-AYHL009W-A BRO1P48582 844 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A YGR066CP53242 292 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A YPS3Q12303 508 aa2.02□□□□□ -2.09
YHL009W-AYHL009W-A BRR1Q99177 341 aaPredicted RBP2.02□□□□□ -2.09
YHL009W-AYHL009W-A RAD61Q99359 647 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms