RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C LAG1P38703 411 aa3.43□□□□□ -1.86
MSM1YGR171C RMD9P53140 646 aaKnown RBP3.43□□□□□ -1.86
MSM1YGR171C PKP2P53170 491 aa3.43□□□□□ -1.86
MSM1YGR171C SOL4P53315 255 aa3.43□□□□□ -1.86
MSM1YGR171C CWC21Q03375 135 aaKnown RBP3.43□□□□□ -1.86
MSM1YGR171C ACL4Q03771 387 aa3.43□□□□□ -1.86
MSM1YGR171C ECI1Q05871 280 aa3.43□□□□□ -1.86
MSM1YGR171C SPH1Q06160 661 aa3.43□□□□□ -1.86
MSM1YGR171C MMR1Q06324 491 aa3.43□□□□□ -1.86
MSM1YGR171C UAF30Q08747 228 aa3.43□□□□□ -1.86
MSM1YGR171C YOR365CQ08844 703 aa3.43□□□□□ -1.86
MSM1YGR171C URA4P20051 364 aa3.42□□□□□ -1.86
MSM1YGR171C DUG2P38149 878 aa3.42□□□□□ -1.86
MSM1YGR171C GND1P38720 489 aaKnown RBP3.42□□□□□ -1.86
MSM1YGR171C PHO90P39535 881 aa3.42□□□□□ -1.86
MSM1YGR171C MKT1P40850 830 aaKnown RBP3.42□□□□□ -1.86
MSM1YGR171C RPT4P53549 437 aaKnown RBP3.42□□□□□ -1.86
MSM1YGR171C YML122CQ03207 126 aa3.42□□□□□ -1.86
MSM1YGR171C IZH1Q03419 316 aa3.42□□□□□ -1.86
MSM1YGR171C YMR130WQ04223 302 aa3.42□□□□□ -1.86
MSM1YGR171C APL5Q08951 932 aaKnown RBP3.42□□□□□ -1.86
MSM1YGR171C AEP3Q12089 606 aa3.42□□□□□ -1.86
MSM1YGR171C YLR278CQ05854 1341 aa3.42□□□□□ -1.86
MSM1YGR171C RAD52P06778 471 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C RPL1AP0CX43 217 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C RPL1BP0CX44 217 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C OM45P16547 393 aa3.41□□□□□ -1.86
MSM1YGR171C SPO7P18410 259 aa3.41□□□□□ -1.86
MSM1YGR171C SNC1P31109 117 aa3.41□□□□□ -1.86
MSM1YGR171C MSN2P33748 704 aa3.41□□□□□ -1.86
MSM1YGR171C HEL1P36113 551 aa3.41□□□□□ -1.86
MSM1YGR171C SPC97P38863 823 aa3.41□□□□□ -1.86
MSM1YGR171C PCI8P40512 444 aa3.41□□□□□ -1.86
MSM1YGR171C YIR016WP40572 265 aa3.41□□□□□ -1.86
MSM1YGR171C DRN1P53255 507 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C BUD32P53323 261 aa3.41□□□□□ -1.86
MSM1YGR171C YNL181WP53878 407 aa3.41□□□□□ -1.86
MSM1YGR171C SSK1Q07084 712 aa3.41□□□□□ -1.86
MSM1YGR171C VAM3Q12241 283 aa3.41□□□□□ -1.86
MSM1YGR171C YDR061WQ12298 539 aa3.41□□□□□ -1.86
MSM1YGR171C SAC3P46674 1301 aa3.41□□□□□ -1.86
MSM1YGR171C RPL42AP0CX27 106 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C RPL42BP0CX28 106 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C YCP4P25349 247 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C MCM4P30665 933 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C HIR2P32480 875 aa3.41□□□□□ -1.86
MSM1YGR171C YPK3P38070 525 aa3.41□□□□□ -1.86
MSM1YGR171C MMS4P38257 691 aa3.41□□□□□ -1.86
MSM1YGR171C VHC1P38329 1120 aa3.41□□□□□ -1.86
MSM1YGR171C KEL1P38853 1164 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C SMC2P38989 1170 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C SER3P40054 469 aa3.41□□□□□ -1.86
MSM1YGR171C YMR147WP40218 223 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C GAT1P43574 510 aa3.41□□□□□ -1.86
MSM1YGR171C YJL132WP47014 750 aa3.41□□□□□ -1.86
MSM1YGR171C MDV1P47025 714 aa3.41□□□□□ -1.86
MSM1YGR171C YJR154WP47181 346 aa3.41□□□□□ -1.86
MSM1YGR171C MLC1P53141 149 aa3.41□□□□□ -1.86
MSM1YGR171C ERV25P54837 211 aaKnown RBP3.41□□□□□ -1.86
MSM1YGR171C TIM11P81449 96 aaPredicted RBP3.41□□□□□ -1.86
MSM1YGR171C YPL014WQ02606 381 aa3.41□□□□□ -1.86
MSM1YGR171C EKI1Q03764 534 aa3.41□□□□□ -1.86
MSM1YGR171C PPM1Q04081 328 aa3.41□□□□□ -1.86
MSM1YGR171C MED2Q12124 431 aa3.41□□□□□ -1.86
MSM1YGR171C TFB5Q3E7C1 72 aaPredicted RBP3.41□□□□□ -1.86
MSM1YGR171C NBL1Q3E7Y6 73 aa3.41□□□□□ -1.86
MSM1YGR171C LPD1P09624 499 aaKnown RBP3.4□□□□□ -1.87
MSM1YGR171C ATP10P18496 279 aa3.4□□□□□ -1.87
MSM1YGR171C CLN1P20437 546 aa3.4□□□□□ -1.87
MSM1YGR171C SGV1P23293 657 aaKnown RBP3.4□□□□□ -1.87
MSM1YGR171C PDR3P33200 976 aa3.4□□□□□ -1.87
MSM1YGR171C SRB2P34162 210 aa3.4□□□□□ -1.87
MSM1YGR171C BFR1P38934 470 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
MSM1YGR171C OSW5P40219 148 aa3.4□□□□□ -1.87
MSM1YGR171C IAH1P41734 238 aa3.4□□□□□ -1.87
MSM1YGR171C POP1P41812 875 aa3.4□□□□□ -1.87
MSM1YGR171C SCW4P53334 386 aaKnown RBP3.4□□□□□ -1.87
MSM1YGR171C YNR068CP53754 272 aa3.4□□□□□ -1.87
MSM1YGR171C NUP100Q02629 959 aa3.4□□□□□ -1.87
MSM1YGR171C RRN5Q02983 363 aa3.4□□□□□ -1.87
MSM1YGR171C DBP9Q06218 594 aaKnown RBP3.4□□□□□ -1.87
MSM1YGR171C UBX3Q12229 455 aa3.4□□□□□ -1.87
MSM1YGR171C PFK27Q12471 397 aaPredicted RBP3.4□□□□□ -1.87
MSM1YGR171C RRP36Q12481 300 aaPredicted RBP3.4□□□□□ -1.87
MSM1YGR171C RIP1P08067 215 aa3.39□□□□□ -1.87
MSM1YGR171C TYR1P20049 452 aa3.39□□□□□ -1.87
MSM1YGR171C GID7P25569 745 aa3.39□□□□□ -1.87
MSM1YGR171C PHO91P27514 894 aa3.39□□□□□ -1.87
MSM1YGR171C VPS17P32913 551 aa3.39□□□□□ -1.87
MSM1YGR171C SUR1P33300 382 aa3.39□□□□□ -1.87
MSM1YGR171C ASK1P35734 292 aa3.39□□□□□ -1.87
MSM1YGR171C YDR089WP38966 869 aa3.39□□□□□ -1.87
MSM1YGR171C PCL6P40038 420 aa3.39□□□□□ -1.87
MSM1YGR171C ALT2P52892 507 aa3.39□□□□□ -1.87
MSM1YGR171C ESBP6P53918 673 aa3.39□□□□□ -1.87
MSM1YGR171C RHO4Q00246 291 aa3.39□□□□□ -1.87
MSM1YGR171C EGD1Q02642 157 aaKnown RBP3.39□□□□□ -1.87
MSM1YGR171C RBA50Q04418 439 aa3.39□□□□□ -1.87
MSM1YGR171C DCS1Q06151 350 aa3.39□□□□□ -1.87
MSM1YGR171C NOP6Q07623 225 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms