RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W NDE2Q07500 545 aa7.84□□□□□ -1.15
UFD1YGR048W ENT4Q07872 247 aa7.84□□□□□ -1.15
UFD1YGR048W ZEO1Q08245 113 aa7.84□□□□□ -1.15
UFD1YGR048W APC9Q12107 265 aa7.84□□□□□ -1.15
UFD1YGR048W OSW2Q12202 724 aa7.84□□□□□ -1.15
UFD1YGR048W KCS1Q12494 1050 aa7.84□□□□□ -1.15
UFD1YGR048W TDH1P00360 332 aaKnown RBP7.83□□□□□ -1.16
UFD1YGR048W REP2P03872 296 aa7.83□□□□□ -1.16
UFD1YGR048W ARG3P05150 338 aa7.83□□□□□ -1.16
UFD1YGR048W IMA3P0CW40 589 aa7.83□□□□□ -1.16
UFD1YGR048W IMA4P0CW41 589 aa7.83□□□□□ -1.16
UFD1YGR048W PHO8P11491 566 aa7.83□□□□□ -1.16
UFD1YGR048W SRO9P25567 434 aaKnown RBP7.83□□□□□ -1.16
UFD1YGR048W ZRT3P34240 503 aa7.83□□□□□ -1.16
UFD1YGR048W APM3P38153 483 aa7.83□□□□□ -1.16
UFD1YGR048W PZF1P39933 429 aa7.83□□□□□ -1.16
UFD1YGR048W SCC4P40090 624 aa7.83□□□□□ -1.16
UFD1YGR048W PIG2P40187 538 aa7.83□□□□□ -1.16
UFD1YGR048W YJR030CP47101 745 aa7.83□□□□□ -1.16
UFD1YGR048W DIA3P52290 468 aa7.83□□□□□ -1.16
UFD1YGR048W MNT4P53745 580 aa7.83□□□□□ -1.16
UFD1YGR048W MTD1Q02046 320 aaKnown RBP7.83□□□□□ -1.16
UFD1YGR048W ELP3Q02908 557 aaKnown RBP7.83□□□□□ -1.16
UFD1YGR048W SVL3Q03088 825 aaKnown RBP7.83□□□□□ -1.16
UFD1YGR048W YLR224WQ05947 369 aa7.83□□□□□ -1.16
UFD1YGR048W IMA2Q08295 589 aa7.83□□□□□ -1.16
UFD1YGR048W ESA1Q08649 445 aa7.83□□□□□ -1.16
UFD1YGR048W YLL058WQ12198 575 aa7.83□□□□□ -1.16
UFD1YGR048W SVS1Q12254 260 aa7.83□□□□□ -1.16
UFD1YGR048W RBD2Q12270 262 aa7.83□□□□□ -1.16
UFD1YGR048W YPL119C-AQ3E751 87 aa7.83□□□□□ -1.16
UFD1YGR048W MHF1Q3E835 90 aa7.83□□□□□ -1.16
UFD1YGR048W FRS1P15624 595 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W CDC23P16522 626 aa7.82□□□□□ -1.16
UFD1YGR048W VMA5P31412 392 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W PHA2P32452 334 aa7.82□□□□□ -1.16
UFD1YGR048W DPH2P32461 534 aa7.82□□□□□ -1.16
UFD1YGR048W PDR3P33200 976 aa7.82□□□□□ -1.16
UFD1YGR048W SPT10P35208 640 aa7.82□□□□□ -1.16
UFD1YGR048W YPT52P36018 234 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W MRPL7P36519 292 aa7.82□□□□□ -1.16
UFD1YGR048W ERT1P38140 529 aa7.82□□□□□ -1.16
UFD1YGR048W APM2P38700 605 aa7.82□□□□□ -1.16
UFD1YGR048W OCA5P38738 679 aa7.82□□□□□ -1.16
UFD1YGR048W FSH1P38777 243 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W YAP1801P38856 637 aa7.82□□□□□ -1.16
UFD1YGR048W RBG1P39729 369 aa7.82□□□□□ -1.16
UFD1YGR048W MAD2P40958 196 aa7.82□□□□□ -1.16
UFD1YGR048W CUZ1P53899 274 aa7.82□□□□□ -1.16
UFD1YGR048W KAP120Q02932 1032 aa7.82□□□□□ -1.16
UFD1YGR048W AIM36Q03798 255 aa7.82□□□□□ -1.16
UFD1YGR048W INM2Q05533 292 aa7.82□□□□□ -1.16
UFD1YGR048W ASR1Q06834 288 aa7.82□□□□□ -1.16
UFD1YGR048W PEX27Q08580 376 aa7.82□□□□□ -1.16
UFD1YGR048W ENV7Q12003 364 aa7.82□□□□□ -1.16
UFD1YGR048W YOR283WQ12040 230 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W CMR1Q12510 522 aaKnown RBP7.82□□□□□ -1.16
UFD1YGR048W RGS2Q99188 309 aa7.82□□□□□ -1.16
UFD1YGR048W FKS1P38631 1876 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W ARG81P05085 880 aa7.81□□□□□ -1.16
UFD1YGR048W RHO2P06781 192 aa7.81□□□□□ -1.16
UFD1YGR048W MAS1P10507 462 aa7.81□□□□□ -1.16
UFD1YGR048W ZWF1P11412 505 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W GUK1P15454 187 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W GLK1P17709 500 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W PRO3P32263 286 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W ISC10P32645 267 aa7.81□□□□□ -1.16
UFD1YGR048W ERV15P38312 142 aa7.81□□□□□ -1.16
UFD1YGR048W MSC7P38694 644 aa7.81□□□□□ -1.16
UFD1YGR048W PCL6P40038 420 aa7.81□□□□□ -1.16
UFD1YGR048W TMA108P40462 946 aa7.81□□□□□ -1.16
UFD1YGR048W IMA5P40884 581 aa7.81□□□□□ -1.16
UFD1YGR048W GSM1P42950 618 aa7.81□□□□□ -1.16
UFD1YGR048W YJL043WP47053 257 aa7.81□□□□□ -1.16
UFD1YGR048W COX16P47081 118 aa7.81□□□□□ -1.16
UFD1YGR048W YBP2P53169 641 aa7.81□□□□□ -1.16
UFD1YGR048W STP1Q00947 519 aa7.81□□□□□ -1.16
UFD1YGR048W SPR6Q01684 191 aa7.81□□□□□ -1.16
UFD1YGR048W TIM44Q01852 431 aa7.81□□□□□ -1.16
UFD1YGR048W BUL2Q03758 920 aaKnown RBP7.81□□□□□ -1.16
UFD1YGR048W PEX12Q04370 399 aa7.81□□□□□ -1.16
UFD1YGR048W PHO92Q06390 306 aa7.81□□□□□ -1.16
UFD1YGR048W YDL086WQ07505 273 aa7.81□□□□□ -1.16
UFD1YGR048W PUS9Q12069 462 aa7.81□□□□□ -1.16
UFD1YGR048W AEP3Q12089 606 aa7.81□□□□□ -1.16
UFD1YGR048W YGK3Q12222 375 aaPredicted RBP7.81□□□□□ -1.16
UFD1YGR048W MOT1P32333 1867 aa7.81□□□□□ -1.16
UFD1YGR048W COBP00163 385 aa7.8□□□□□ -1.16
UFD1YGR048W MIS1P09440 975 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W COS2P0CX12 379 aa7.8□□□□□ -1.16
UFD1YGR048W COS3P0CX13 379 aa7.8□□□□□ -1.16
UFD1YGR048W CHS2P14180 963 aa7.8□□□□□ -1.16
UFD1YGR048W MGR1P25573 417 aa7.8□□□□□ -1.16
UFD1YGR048W YCR101CP25607 182 aa7.8□□□□□ -1.16
UFD1YGR048W PWP2P25635 923 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W SIP1P32578 815 aa7.8□□□□□ -1.16
UFD1YGR048W PTC1P35182 281 aa7.8□□□□□ -1.16
UFD1YGR048W APN2P38207 520 aa7.8□□□□□ -1.16
UFD1YGR048W ALG14P38242 237 aa7.8□□□□□ -1.16
UFD1YGR048W MBA1P38300 278 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms