RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W RAD61Q99359 647 aa6.42□□□□□ -1.38
SNU71YGR013W VPS63O13549 108 aa6.41□□□□□ -1.38
SNU71YGR013W PDE2P06776 526 aa6.41□□□□□ -1.38
SNU71YGR013W GCD2P12754 651 aaPredicted RBP6.41□□□□□ -1.38
SNU71YGR013W MCM4P30665 933 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W MNN9P39107 395 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W CIN4P39110 191 aa6.41□□□□□ -1.38
SNU71YGR013W PMT6P42934 759 aa6.41□□□□□ -1.38
SNU71YGR013W SLG1P54867 378 aa6.41□□□□□ -1.38
SNU71YGR013W YIL002W-AQ3E7Z5 69 aa6.41□□□□□ -1.38
SNU71YGR013W PRP2P20095 876 aaPredicted RBP6.41□□□□□ -1.38
SNU71YGR013W RRP1P35178 278 aaPredicted RBP6.41□□□□□ -1.38
SNU71YGR013W PIH1P38768 344 aa6.41□□□□□ -1.38
SNU71YGR013W KEL1P38853 1164 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W SSO2P39926 295 aa6.41□□□□□ -1.38
SNU71YGR013W YFR018CP43599 363 aa6.41□□□□□ -1.38
SNU71YGR013W RPS10BP46784 105 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W ERG26P53199 349 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W CWC21Q03375 135 aaKnown RBP6.41□□□□□ -1.38
SNU71YGR013W MRPL23Q12487 163 aaPredicted RBP6.41□□□□□ -1.38
SNU71YGR013W ANS1P38832 159 aa6.4□□□□□ -1.39
SNU71YGR013W LIN1P38852 340 aaPredicted RBP6.4□□□□□ -1.39
SNU71YGR013W CIN1P40987 1014 aa6.4□□□□□ -1.39
SNU71YGR013W LAM5P43560 674 aa6.4□□□□□ -1.39
SNU71YGR013W NMD5P46970 1048 aa6.4□□□□□ -1.39
SNU71YGR013W MPS2P53159 387 aa6.4□□□□□ -1.39
SNU71YGR013W RRB1Q04225 511 aaKnown RBP6.4□□□□□ -1.39
SNU71YGR013W COR1P07256 457 aa6.39□□□□□ -1.39
SNU71YGR013W CHO1P08456 276 aa6.39□□□□□ -1.39
SNU71YGR013W WHI2P12611 486 aa6.39□□□□□ -1.39
SNU71YGR013W PTC6P25646 442 aa6.39□□□□□ -1.39
SNU71YGR013W RIM1P32445 135 aaKnown RBP6.39□□□□□ -1.39
SNU71YGR013W MBB1P39534 108 aa6.39□□□□□ -1.39
SNU71YGR013W ARO10Q06408 635 aa6.39□□□□□ -1.39
SNU71YGR013W YLR419WQ06698 1435 aaKnown RBP6.39□□□□□ -1.39
SNU71YGR013W LEU4P06208 619 aaKnown RBP6.39□□□□□ -1.39
SNU71YGR013W GPH1P06738 902 aaKnown RBP6.39□□□□□ -1.39
SNU71YGR013W PUT2P07275 575 aa6.39□□□□□ -1.39
SNU71YGR013W SAG1P20840 650 aa6.39□□□□□ -1.39
SNU71YGR013W ERG4P25340 473 aa6.39□□□□□ -1.39
SNU71YGR013W COY1P34237 679 aa6.39□□□□□ -1.39
SNU71YGR013W YBR139WP38109 508 aa6.39□□□□□ -1.39
SNU71YGR013W PCA1P38360 1216 aa6.39□□□□□ -1.39
SNU71YGR013W WAR1Q03631 944 aa6.39□□□□□ -1.39
SNU71YGR013W EMI2Q04409 500 aaKnown RBP6.39□□□□□ -1.39
SNU71YGR013W ECM30Q06673 1274 aa6.39□□□□□ -1.39
SNU71YGR013W LEA1Q08963 238 aaPredicted RBP6.39□□□□□ -1.39
SNU71YGR013W MHP1P43638 1398 aa6.38□□□□□ -1.39
SNU71YGR013W COX3P00420 269 aa6.38□□□□□ -1.39
SNU71YGR013W RIP1P08067 215 aa6.38□□□□□ -1.39
SNU71YGR013W PET123P17558 318 aa6.38□□□□□ -1.39
SNU71YGR013W DBP8P38719 431 aa6.38□□□□□ -1.39
SNU71YGR013W CTM1P38818 585 aa6.38□□□□□ -1.39
SNU71YGR013W YHR210CP38893 341 aa6.38□□□□□ -1.39
SNU71YGR013W YMR147WP40218 223 aaKnown RBP6.38□□□□□ -1.39
SNU71YGR013W RSM23Q01163 450 aa6.38□□□□□ -1.39
SNU71YGR013W SMA2Q04658 369 aa6.38□□□□□ -1.39
SNU71YGR013W MDM20Q12387 796 aaKnown RBP6.38□□□□□ -1.39
SNU71YGR013W ZPS1Q12512 249 aa6.38□□□□□ -1.39
SNU71YGR013W PMR1P13586 950 aa6.37□□□□□ -1.39
SNU71YGR013W YJU2P28320 278 aaPredicted RBP6.37□□□□□ -1.39
SNU71YGR013W BEM1P29366 551 aa6.37□□□□□ -1.39
SNU71YGR013W MRPL9P31334 269 aa6.37□□□□□ -1.39
SNU71YGR013W TRM2P33753 639 aa6.37□□□□□ -1.39
SNU71YGR013W YPR003CP53394 754 aa6.37□□□□□ -1.39
SNU71YGR013W ADE13Q05911 482 aaKnown RBP6.37□□□□□ -1.39
SNU71YGR013W MDM30Q05930 598 aa6.37□□□□□ -1.39
SNU71YGR013W MCP2Q06567 569 aa6.37□□□□□ -1.39
SNU71YGR013W NCE102Q12207 173 aaRIP-Chip data6.37□□□□□ -1.39not detected
SNU71YGR013W ALG7P07286 448 aa6.36□□□□□ -1.39
SNU71YGR013W ALG1P16661 449 aa6.36□□□□□ -1.39
SNU71YGR013W PRP6P19735 899 aaPredicted RBP6.36□□□□□ -1.39
SNU71YGR013W HNM1P19807 563 aa6.36□□□□□ -1.39
SNU71YGR013W KRE2P27809 442 aa6.36□□□□□ -1.39
SNU71YGR013W PMI40P29952 429 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W PUB1P32588 453 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SNU71YGR013W RPT5P33297 434 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W MTR2P34232 184 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W LSB1P53281 241 aa6.36□□□□□ -1.39
SNU71YGR013W AAT1Q01802 451 aa6.36□□□□□ -1.39
SNU71YGR013W YMR178WQ03219 274 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W RKM1Q08961 583 aaPredicted RBP6.36□□□□□ -1.39
SNU71YGR013W AHA1Q12449 350 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W RRD2Q12461 358 aa6.36□□□□□ -1.39
SNU71YGR013W SUP35P05453 685 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W CDC37P06101 506 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W RHO2P06781 192 aa6.36□□□□□ -1.39
SNU71YGR013W ADE5,7P07244 802 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W PEP4P07267 405 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W GBP2P25555 427 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SNU71YGR013W PTK1P36002 662 aaPredicted RBP6.36□□□□□ -1.39
SNU71YGR013W ATP3P38077 311 aaKnown RBP6.36□□□□□ -1.39
SNU71YGR013W VHC1P38329 1120 aa6.36□□□□□ -1.39
SNU71YGR013W LOC1P43586 204 aaPredicted RBP6.36□□□□□ -1.39
SNU71YGR013W SMA1Q02651 245 aa6.36□□□□□ -1.39
SNU71YGR013W EKI1Q03764 534 aa6.36□□□□□ -1.39
SNU71YGR013W STE23Q06010 1027 aa6.36□□□□□ -1.39
SNU71YGR013W POS5Q06892 414 aa6.36□□□□□ -1.39
SNU71YGR013W YDL057WQ07379 328 aa6.36□□□□□ -1.39
SNU71YGR013W ULA1Q12059 462 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms