RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	YET3	Q07451	203 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	HBT1	Q07653	1046 aa	Known RBP	4.56	□□□□□ -1.68
TYW3	YGL050W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TYW3	YGL050W	ATG10	Q07879	167 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	YLR053C	Q12026	108 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	NUS1	Q12063	375 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	RGS2	Q99188	309 aa		4.56	□□□□□ -1.68
TYW3	YGL050W	AMD2	P22580	549 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	YCR099C	P25657	155 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	TFB1	P32776	642 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	PTH2	P34222	208 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	MUD2	P36084	527 aa	Known RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	ALY1	P36117	915 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	RPF2	P36160	344 aa	Known RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	EFM1	P38732	585 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	YHI9	P38765	294 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	YHR045W	P38775	560 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	LIN1	P38852	340 aa	Predicted RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	YJL107C	P42947	387 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	NOP9	P47077	666 aa	Known RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	NBP35	P52920	328 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	IST1	P53843	298 aa	Predicted RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	YDR056C	Q12025	205 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	YOR012W	Q12351	137 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	BRR1	Q99177	341 aa	Predicted RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	TAD3	Q9URQ3	322 aa		4.55	□□□□□ -1.68
TYW3	YGL050W	ACC1	Q00955	2233 aa	Known RBP	4.55	□□□□□ -1.68
TYW3	YGL050W	UBR1	P19812	1950 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YPR089W	O13585	888 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	HEM2	P05373	342 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	ILV2	P07342	687 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	NMT1	P14743	455 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	AMD1	P15274	810 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
TYW3	YGL050W	SEC14	P24280	304 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	AAD3	P25612	363 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	PHA2	P32452	334 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SPR1	P32603	445 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	GDA1	P32621	518 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	TIP20	P33891	701 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YPT52	P36018	234 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	OAF3	P36023	863 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SPC42	P36094	363 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	GMH1	P36125	273 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	IML3	P38265	245 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YHR182W	P38870	785 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SEO1	P39709	593 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YRB1	P41920	201 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	CTK3	P46963	296 aa	Predicted RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	PET130	P47065	347 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YJR096W	P47137	282 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	BOL2	P53082	120 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	BIO4	P53630	237 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	ZRG17	P53735	605 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	FRE4	P53746	719 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SLT2	Q00772	484 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	YFT2	Q06676	274 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	GRS2	Q06817	618 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SLD7	Q08457	257 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	SAM4	Q08985	325 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	TRM8	Q12009	286 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	CHS5	Q12114	671 aa	Known RBP	4.54	□□□□□ -1.68
TYW3	YGL050W	YKL033W-A	Q86ZR7	236 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	NAG1	Q8TGN9	163 aa		4.54	□□□□□ -1.68
TYW3	YGL050W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
TYW3	YGL050W	SRV2	P17555	526 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	TRX2	P22803	104 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	PHO84	P25297	587 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	MRE11	P32829	692 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	ASK1	P35734	292 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	BEM4	P39011	633 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	GIM4	P40005	111 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	MEP1	P40260	492 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	PEP8	P40335	379 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	UTP18	P40362	594 aa	Predicted RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	QRI1	P43123	477 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	FAR3	P46671	204 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	LIA1	P47120	325 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	EFM5	P53200	248 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	COX18	P53239	316 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	CLD1	P53264	445 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	FHN1	P53279	174 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	LSC1	P53598	329 aa	Known RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	RCF2	P53721	224 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	YNL260C	P53846	198 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	SPP2	Q02521	185 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	YMR209C	Q03648	457 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	USA1	Q03714	838 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	TAF12	Q03761	539 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	CSN9	Q03981	162 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	FAR8	Q05040	523 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	SEC10	Q06245	871 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	THI73	Q07904	523 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	VPS68	Q12016	184 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	SMF3	Q12078	473 aa	Predicted RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	MLH3	Q12083	715 aa		4.53	□□□□□ -1.68
TYW3	YGL050W	RTK1	Q12100	620 aa	Predicted RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	MRH1	Q12117	320 aa	Predicted RBP	4.53	□□□□□ -1.68
TYW3	YGL050W	MDY2	Q12285	212 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms