RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	HAT2	P39984	401 aa		4.41	□□□□□ -1.7
SCL1	YGL011C	RPR2	P40571	144 aa		4.41	□□□□□ -1.7
SCL1	YGL011C	MEP2	P41948	499 aa		4.41	□□□□□ -1.7
SCL1	YGL011C	GWT1	P47026	490 aa		4.41	□□□□□ -1.7
SCL1	YGL011C	VPS74	Q06385	345 aa		4.41	□□□□□ -1.7
SCL1	YGL011C	RIP1	P08067	215 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	YML002W	P0CF17	737 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	URA7	P28274	579 aa	Known RBP	4.4	□□□□□ -1.71
SCL1	YGL011C	DBF4	P32325	704 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	CCT2	P39076	527 aa	Known RBP	4.4	□□□□□ -1.71
SCL1	YGL011C	DHH1	P39517	506 aa	Known RBP	4.4	□□□□□ -1.71
SCL1	YGL011C	SHO1	P40073	367 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	ELP2	P42935	788 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	FMS1	P50264	508 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	CRZ1	P53968	678 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	SOV1	Q04748	898 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	RRP45	Q05636	305 aa	Known RBP	4.4	□□□□□ -1.71
SCL1	YGL011C	AYT1	Q12226	474 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	SET6	Q12529	373 aa		4.4	□□□□□ -1.71
SCL1	YGL011C	LOS1	P33418	1100 aa	Predicted RBP	4.39	□□□□□ -1.71
SCL1	YGL011C	FRE2	P36033	711 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	ARA1	P38115	344 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	VHC1	P38329	1120 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	RPH1	P39956	796 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	YFR016C	P43597	1233 aa	Known RBP	4.39	□□□□□ -1.71
SCL1	YGL011C	SCS3	P53012	380 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	YGL138C	P53122	345 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	ARK1	P53974	638 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	KAP120	Q02932	1032 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	ERP4	Q12450	207 aa		4.39	□□□□□ -1.71
SCL1	YGL011C	HEM2	P05373	342 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	RPL20A	P0CX23	172 aa	Known RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	RPL20B	P0CX24	172 aa	Predicted RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	CLB1	P24868	471 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	ERV1	P27882	189 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	PRP21	P32524	280 aa	Predicted RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	VMA8	P32610	256 aa	Known RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	PMU1	P36069	295 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	FMP46	P36141	133 aa	Known RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	ISC1	P40015	477 aa	Known RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	ALG8	P40351	577 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	GCD10	P41814	478 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	NCS2	P53923	493 aa	Predicted RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	AIM32	Q04689	311 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	ERP1	Q05359	219 aa	Known RBP	4.38	□□□□□ -1.71
SCL1	YGL011C	VAM3	Q12241	283 aa		4.38	□□□□□ -1.71
SCL1	YGL011C	SEC63	P14906	663 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	TFB1	P32776	642 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	GYP6	P32806	458 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	REC114	P32841	428 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	NTC20	P38302	140 aa	Predicted RBP	4.37	□□□□□ -1.71
SCL1	YGL011C	TRS85	P46944	698 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	COS5	P47187	383 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	YGL260W	P53056	76 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	DON1	Q05610	365 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	COS7	Q07788	383 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	ISA2	Q12425	185 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	YMR230W-A	Q3E7B5	62 aa		4.37	□□□□□ -1.71
SCL1	YGL011C	BEM1	P29366	551 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	SIN4	P32259	974 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	RSM22	P36056	628 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	SRP72	P38688	640 aa	Known RBP	4.36	□□□□□ -1.71
SCL1	YGL011C	MDM31	P38880	579 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	RPS0B	P46654	252 aa	Known RBP	4.36	□□□□□ -1.71
SCL1	YGL011C	TCB2	P48231	1178 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	AVT4	P50944	713 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	RSC1	P53236	928 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	PCP1	P53259	346 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	SKO1	Q02100	647 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	YDR387C	Q04162	555 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	HSP31	Q04432	237 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	MDM30	Q05930	598 aa		4.36	□□□□□ -1.71
SCL1	YGL011C	CYB2	P00175	591 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	PUT3	P25502	979 aa	Predicted RBP	4.35	□□□□□ -1.71
SCL1	YGL011C	KRE2	P27809	442 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	PRO3	P32263	286 aa	Known RBP	4.35	□□□□□ -1.71
SCL1	YGL011C	AGA1	P32323	725 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	HIR2	P32480	875 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	PIM1	P36775	1133 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	YCR041W	P37265	110 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	RRT2	P38332	387 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	YJL213W	P40896	331 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	SAS2	P40963	338 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	ZIM17	P42844	174 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	YDL186W	P48568	277 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	COS10	P52924	374 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	DSL1	P53847	754 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	CTF3	Q12748	733 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	SMC6	Q12749	1114 aa		4.35	□□□□□ -1.71
SCL1	YGL011C	HOM3	P10869	527 aa		4.34	□□□□□ -1.71
SCL1	YGL011C	SRV2	P17555	526 aa	Known RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	URA4	P20051	364 aa		4.34	□□□□□ -1.71
SCL1	YGL011C	MCK1	P21965	375 aa	Known RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	RPI1	P23250	407 aa	Known RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	RNA14	P25298	677 aa	Known RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	GEX1	P25596	615 aa		4.34	□□□□□ -1.71
SCL1	YGL011C	APE2	P32454	952 aa	Known RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	RFC3	P38629	340 aa		4.34	□□□□□ -1.71
SCL1	YGL011C	CAK1	P43568	368 aa	Predicted RBP	4.34	□□□□□ -1.71
SCL1	YGL011C	WSC2	P53832	503 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms