RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C RHO2P06781 192 aa1.73□□□□□ -2.13
SWI5YDR146C RIP1P08067 215 aa1.73□□□□□ -2.13
SWI5YDR146C IDH2P28241 369 aaKnown RBP1.73□□□□□ -2.13
SWI5YDR146C RAD14P28519 371 aa1.73□□□□□ -2.13
SWI5YDR146C PRP21P32524 280 aaPredicted RBP1.73□□□□□ -2.13
SWI5YDR146C GYP6P32806 458 aa1.73□□□□□ -2.13
SWI5YDR146C NIP100P33420 868 aa1.73□□□□□ -2.13
SWI5YDR146C SAS3P34218 831 aa1.73□□□□□ -2.13
SWI5YDR146C PCA1P38360 1216 aa1.73□□□□□ -2.13
SWI5YDR146C RFC3P38629 340 aa1.73□□□□□ -2.13
SWI5YDR146C DLD2P46681 530 aaKnown RBP1.73□□□□□ -2.13
SWI5YDR146C YGR149WP48236 432 aa1.73□□□□□ -2.13
SWI5YDR146C ARX1Q03862 593 aaKnown RBP1.73□□□□□ -2.13
SWI5YDR146C YDR131CQ03899 556 aa1.73□□□□□ -2.13
SWI5YDR146C TIP41Q12199 356 aa1.73□□□□□ -2.13
SWI5YDR146C INH1P01097 85 aa1.72□□□□□ -2.13
SWI5YDR146C GPH1P06738 902 aaKnown RBP1.72□□□□□ -2.13
SWI5YDR146C SPS4P09937 338 aa1.72□□□□□ -2.13
SWI5YDR146C PMR1P13586 950 aa1.72□□□□□ -2.13
SWI5YDR146C FUN19P28003 413 aaPredicted RBP1.72□□□□□ -2.13
SWI5YDR146C PIM1P36775 1133 aa1.72□□□□□ -2.13
SWI5YDR146C OTU2P38747 307 aaKnown RBP1.72□□□□□ -2.13
SWI5YDR146C OGG1P53397 376 aaPredicted RBP1.72□□□□□ -2.13
SWI5YDR146C MSO1P53604 210 aaKnown RBP1.72□□□□□ -2.13
SWI5YDR146C SYF1Q04048 859 aaPredicted RBP1.72□□□□□ -2.13
SWI5YDR146C MDM30Q05930 598 aa1.72□□□□□ -2.13
SWI5YDR146C VTA1Q06263 330 aa1.72□□□□□ -2.13
SWI5YDR146C YCL021W-AQ96VH3 125 aa1.72□□□□□ -2.13
SWI5YDR146C YML133CQ03099 1374 aa1.72□□□□□ -2.13
SWI5YDR146C YLL067CQ07888 1374 aa1.72□□□□□ -2.13
SWI5YDR146C YLL066CQ99208 1374 aa1.72□□□□□ -2.13
SWI5YDR146C HIP1P06775 603 aa1.72□□□□□ -2.13
SWI5YDR146C LPD1P09624 499 aaKnown RBP1.72□□□□□ -2.13
SWI5YDR146C CPR3P25719 182 aa1.72□□□□□ -2.13
SWI5YDR146C PRO3P32263 286 aaKnown RBP1.72□□□□□ -2.13
SWI5YDR146C AFG1P32317 509 aa1.72□□□□□ -2.13
SWI5YDR146C RML2P32611 393 aa1.72□□□□□ -2.13
SWI5YDR146C TUL1P36096 758 aa1.72□□□□□ -2.13
SWI5YDR146C AVT5P38176 459 aa1.72□□□□□ -2.13
SWI5YDR146C ELP2P42935 788 aa1.72□□□□□ -2.13
SWI5YDR146C HNT3Q08702 217 aa1.72□□□□□ -2.13
SWI5YDR146C YER078W-AQ3E7A2 54 aa1.72□□□□□ -2.13
SWI5YDR146C YLR278CQ05854 1341 aa1.71□□□□□ -2.13
SWI5YDR146C LEU4P06208 619 aaKnown RBP1.71□□□□□ -2.14
SWI5YDR146C PPH22P23595 377 aa1.71□□□□□ -2.14
SWI5YDR146C SIN4P32259 974 aa1.71□□□□□ -2.14
SWI5YDR146C FRE2P36033 711 aa1.71□□□□□ -2.14
SWI5YDR146C POP1P41812 875 aa1.71□□□□□ -2.14
SWI5YDR146C GPD2P41911 440 aaKnown RBP1.71□□□□□ -2.14
SWI5YDR146C YJL132WP47014 750 aa1.71□□□□□ -2.14
SWI5YDR146C AVT4P50944 713 aa1.71□□□□□ -2.14
SWI5YDR146C NCS2P53923 493 aaPredicted RBP1.71□□□□□ -2.14
SWI5YDR146C ODC1Q03028 310 aa1.71□□□□□ -2.14
SWI5YDR146C RKM1Q08961 583 aaPredicted RBP1.71□□□□□ -2.14
SWI5YDR146C YLL056CQ12177 298 aa1.71□□□□□ -2.14
SWI5YDR146C SFI1Q12369 946 aa1.71□□□□□ -2.14
SWI5YDR146C CHS1P08004 1131 aa1.7□□□□□ -2.14
SWI5YDR146C RPL3P14126 387 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C CLB3P24870 427 aa1.7□□□□□ -2.14
SWI5YDR146C RPC53P25441 422 aa1.7□□□□□ -2.14
SWI5YDR146C GLC7P32598 312 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C JNM1P36224 373 aa1.7□□□□□ -2.14
SWI5YDR146C RFS1P38234 210 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C GIR2Q03768 265 aaPredicted RBP1.7□□□□□ -2.14
SWI5YDR146C YMR155WQ03795 547 aa1.7□□□□□ -2.14
SWI5YDR146C CLC1P17891 233 aa1.7□□□□□ -2.14
SWI5YDR146C KRE2P27809 442 aa1.7□□□□□ -2.14
SWI5YDR146C NDI1P32340 513 aa1.7□□□□□ -2.14
SWI5YDR146C NOC2P39744 710 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C ISC1P40015 477 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C SAS2P40963 338 aa1.7□□□□□ -2.14
SWI5YDR146C YIP1P53039 248 aa1.7□□□□□ -2.14
SWI5YDR146C RMD9P53140 646 aaKnown RBP1.7□□□□□ -2.14
SWI5YDR146C WSC2P53832 503 aa1.7□□□□□ -2.14
SWI5YDR146C PNG1Q02890 363 aa1.7□□□□□ -2.14
SWI5YDR146C PIR3Q03180 325 aa1.7□□□□□ -2.14
SWI5YDR146C HSP31Q04432 237 aa1.7□□□□□ -2.14
SWI5YDR146C SIL1Q08199 421 aa1.7□□□□□ -2.14
SWI5YDR146C RRG1Q12167 365 aaPredicted RBP1.7□□□□□ -2.14
SWI5YDR146C ERV2Q12284 196 aa1.7□□□□□ -2.14
SWI5YDR146C YCR100CP25606 316 aa1.69□□□□□ -2.14
SWI5YDR146C ADK2P26364 225 aa1.69□□□□□ -2.14
SWI5YDR146C ITR1P30605 584 aa1.69□□□□□ -2.14
SWI5YDR146C CRM1P30822 1084 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C NIP1P32497 812 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C ECM25P32525 599 aa1.69□□□□□ -2.14
SWI5YDR146C YME2P32843 850 aa1.69□□□□□ -2.14
SWI5YDR146C BYE1P36106 594 aa1.69□□□□□ -2.14
SWI5YDR146C YCR041WP37265 110 aa1.69□□□□□ -2.14
SWI5YDR146C YBR139WP38109 508 aa1.69□□□□□ -2.14
SWI5YDR146C CAF40P53829 373 aa1.69□□□□□ -2.14
SWI5YDR146C BNI5P53890 448 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C MRP51Q02950 344 aa1.69□□□□□ -2.14
SWI5YDR146C YLR345WQ06137 509 aa1.69□□□□□ -2.14
SWI5YDR146C YRF1-4O13559 1382 aa1.69□□□□□ -2.14
SWI5YDR146C CBS2P14905 389 aa1.69□□□□□ -2.14
SWI5YDR146C HEM15P16622 393 aa1.69□□□□□ -2.14
SWI5YDR146C URA7P28274 579 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C HCS1P34243 683 aa1.69□□□□□ -2.14
SWI5YDR146C CBP4P37267 147 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms