RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SAM50	P53969	484 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	MSS11	Q03825	758 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	YDR415C	Q04033	374 aa	Predicted RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	PPM1	Q04081	328 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	HSP31	Q04432	237 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	PHO92	Q06390	306 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	PGC1	Q08959	321 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	NFI1	Q12216	726 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	RPL42A	P0CX27	106 aa	Known RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	RPL42B	P0CX28	106 aa	Known RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	YER190C-B	P0CX94	160 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YEL077W-A	P0CX95	160 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YGR296C-B	P0CX96	160 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YPL283W-B	P0CX97	160 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YPR204C-A	P0CX98	160 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	HNM1	P19807	563 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YCR007C	P25354	239 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	MGR1	P25573	417 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	SIN4	P32259	974 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	RRP1	P35178	278 aa	Predicted RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	LAS1	P36146	502 aa	Predicted RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	DAD2	P36162	133 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	ZTA1	P38230	334 aa	Known RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	YER130C	P39959	443 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	PCL6	P40038	420 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	VHS2	P40463	436 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	MDV1	P47025	714 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	RPL15B	P54780	204 aa	Predicted RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	YPL107W	Q02873	248 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	SLD5	Q03406	294 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
RPN5	YDL147W	NRT1	Q08485	598 aa		5.28	□□□□□ -1.56
RPN5	YDL147W	LSP1	Q12230	341 aa	Known RBP	5.28	□□□□□ -1.56
RPN5	YDL147W	SEC62	P21825	274 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	TOA1	P32773	286 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	OSH3	P38713	996 aa	Known RBP	5.27	□□□□□ -1.57
RPN5	YDL147W	ATF1	P40353	525 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	YJR011C	P47086	261 aa	Predicted RBP	5.27	□□□□□ -1.57
RPN5	YDL147W	TOM22	P49334	152 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	RHO5	P53879	331 aa	Known RBP	5.27	□□□□□ -1.57
RPN5	YDL147W	ESBP6	P53918	673 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	RKM1	Q08961	583 aa	Predicted RBP	5.27	□□□□□ -1.57
RPN5	YDL147W	UBX3	Q12229	455 aa		5.27	□□□□□ -1.57
RPN5	YDL147W	CAR1	P00812	333 aa	Known RBP	5.26	□□□□□ -1.57
RPN5	YDL147W	TPM1	P17536	199 aa	Known RBP	5.26	□□□□□ -1.57
RPN5	YDL147W	ACH1	P32316	526 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	SPC34	P36131	295 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
RPN5	YDL147W	ECM27	P47144	725 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	MLC1	P53141	149 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	YIF1	P53845	314 aa	Known RBP	5.26	□□□□□ -1.57
RPN5	YDL147W	TDA7	P53882	636 aa	Predicted RBP	5.26	□□□□□ -1.57
RPN5	YDL147W	STP1	Q00947	519 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	MEH1	Q02205	184 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	YLR456W	Q06199	204 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	YEH2	Q07950	538 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	THI20	Q08224	551 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	CUE5	Q08412	411 aa	Known RBP	5.26	□□□□□ -1.57
RPN5	YDL147W	BUG1	Q12191	341 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	YDR061W	Q12298	539 aa		5.26	□□□□□ -1.57
RPN5	YDL147W	TY1B-A	O13527	1196 aa	Known RBP	5.25	□□□□□ -1.57
RPN5	YDL147W	PMR1	P13586	950 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	MDM10	P18409	493 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	MSP1	P28737	362 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	RIM1	P32445	135 aa	Known RBP	5.25	□□□□□ -1.57
RPN5	YDL147W	ECM15	P35195	104 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	EFM2	P38347	419 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	SPC97	P38863	823 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	FAD1	P38913	306 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	FAU1	P40099	211 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	YTA12	P40341	825 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	BNA3	P47039	444 aa	Known RBP	5.25	□□□□□ -1.57
RPN5	YDL147W	OCA2	P53949	197 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	PRP42	Q03776	544 aa	Known RBP	5.25	□□□□□ -1.57
RPN5	YDL147W	YDR387C	Q04162	555 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	YMR254C	Q04838	102 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	BSC1	Q12140	328 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	RRD2	Q12461	358 aa		5.25	□□□□□ -1.57
RPN5	YDL147W	STF1	P01098	86 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	SCEI	P03882	235 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	TRX1	P22217	103 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	RPI1	P23250	407 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	PHO84	P25297	587 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	APE2	P32454	952 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	RSM22	P36056	628 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	ASC1	P38011	319 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	RRN10	P38204	145 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	CCT2	P39076	527 aa	Known RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	SAS2	P40963	338 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	EPL1	P43572	832 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	PIB2	P53191	635 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	SEC5	P89102	971 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	BET4	Q00618	327 aa		5.24	□□□□□ -1.57
RPN5	YDL147W	KEL3	Q08979	651 aa	Predicted RBP	5.24	□□□□□ -1.57
RPN5	YDL147W	ARO3	P14843	370 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	VMA2	P16140	517 aa	Known RBP	5.23	□□□□□ -1.57
RPN5	YDL147W	GEX1	P25596	615 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	BUB3	P26449	341 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	SMI1	P32566	505 aa		5.23	□□□□□ -1.57
RPN5	YDL147W	OLA1	P38219	394 aa	Known RBP	5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms