RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C YJR061WP40355 935 aa5□□□□□ -1.61
SCM3YDL139C BUD13P46947 266 aaPredicted RBP5□□□□□ -1.61
SCM3YDL139C NOP9P47077 666 aaKnown RBP5□□□□□ -1.61
SCM3YDL139C VPS25P47142 202 aa5□□□□□ -1.61
SCM3YDL139C SPC105P53148 917 aa5□□□□□ -1.61
SCM3YDL139C TEX1P53851 422 aaKnown RBP5□□□□□ -1.61
SCM3YDL139C GTR1Q00582 310 aa5□□□□□ -1.61
SCM3YDL139C RMI1Q02685 241 aa5□□□□□ -1.61
SCM3YDL139C LGE1Q02796 332 aaKnown RBP5□□□□□ -1.61
SCM3YDL139C YMR210WQ03649 449 aa5□□□□□ -1.61
SCM3YDL139C YMR206WQ03695 313 aa5□□□□□ -1.61
SCM3YDL139C ACL4Q03771 387 aa5□□□□□ -1.61
SCM3YDL139C RPN9Q04062 393 aaKnown RBP5□□□□□ -1.61
SCM3YDL139C RTN1Q04947 295 aaKnown RBP5□□□□□ -1.61
SCM3YDL139C GRX8Q05926 109 aa5□□□□□ -1.61
SCM3YDL139C YPS7Q06325 596 aa5□□□□□ -1.61
SCM3YDL139C MCM21Q06675 368 aa5□□□□□ -1.61
SCM3YDL139C DST1P07273 309 aa4.99□□□□□ -1.61
SCM3YDL139C MIS1P09440 975 aaKnown RBP4.99□□□□□ -1.61
SCM3YDL139C TUB1P09733 447 aaKnown RBP4.99□□□□□ -1.61
SCM3YDL139C KAR1P11927 433 aa4.99□□□□□ -1.61
SCM3YDL139C SEC15P22224 910 aa4.99□□□□□ -1.61
SCM3YDL139C YSP3P25036 478 aa4.99□□□□□ -1.61
SCM3YDL139C IMP3P32899 183 aaPredicted RBP4.99□□□□□ -1.61
SCM3YDL139C KTR4P38131 464 aa4.99□□□□□ -1.61
SCM3YDL139C IST3P40565 148 aaPredicted RBP4.99□□□□□ -1.61
SCM3YDL139C BUL1P48524 976 aa4.99□□□□□ -1.61
SCM3YDL139C YPT32P51996 222 aaKnown RBP4.99□□□□□ -1.61
SCM3YDL139C IPI3P53877 555 aa4.99□□□□□ -1.61
SCM3YDL139C CDC14Q00684 551 aa4.99□□□□□ -1.61
SCM3YDL139C MET14Q02196 202 aa4.99□□□□□ -1.61
SCM3YDL139C HMO1Q03973 246 aaKnown RBP4.99□□□□□ -1.61
SCM3YDL139C SPC24Q04477 213 aa4.99□□□□□ -1.61
SCM3YDL139C RCO1Q04779 684 aa4.99□□□□□ -1.61
SCM3YDL139C SNX3Q08826 162 aaKnown RBP4.99□□□□□ -1.61
SCM3YDL139C MDY2Q12285 212 aa4.99□□□□□ -1.61
SCM3YDL139C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
SCM3YDL139C RPS17AP02407 136 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C CDC21P06785 304 aa4.98□□□□□ -1.61
SCM3YDL139C RPS17BP14127 136 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C YAK1P14680 807 aa4.98□□□□□ -1.61
SCM3YDL139C CDC26P14724 124 aa4.98□□□□□ -1.61
SCM3YDL139C PWP1P21304 576 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C AMD2P22580 549 aa4.98□□□□□ -1.61
SCM3YDL139C SPR1P32603 445 aa4.98□□□□□ -1.61
SCM3YDL139C NRP1P32770 719 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
SCM3YDL139C SDH3P33421 198 aa4.98□□□□□ -1.61
SCM3YDL139C LDB7P38210 180 aa4.98□□□□□ -1.61
SCM3YDL139C SRP72P38688 640 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C DUN1P39009 513 aa4.98□□□□□ -1.61
SCM3YDL139C VRG4P40107 337 aa4.98□□□□□ -1.61
SCM3YDL139C SER33P40510 469 aa4.98□□□□□ -1.61
SCM3YDL139C YFR020WP43600 232 aa4.98□□□□□ -1.61
SCM3YDL139C YJL132WP47014 750 aa4.98□□□□□ -1.61
SCM3YDL139C MNT2P53059 558 aa4.98□□□□□ -1.61
SCM3YDL139C BOL2P53082 120 aa4.98□□□□□ -1.61
SCM3YDL139C COX18P53239 316 aa4.98□□□□□ -1.61
SCM3YDL139C YNL143CP53908 130 aa4.98□□□□□ -1.61
SCM3YDL139C PRO2P54885 456 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C REC102Q02721 264 aa4.98□□□□□ -1.61
SCM3YDL139C RLI1Q03195 608 aaKnown RBP4.98□□□□□ -1.61
SCM3YDL139C YML119WQ03208 357 aa4.98□□□□□ -1.61
SCM3YDL139C TAF11Q04226 346 aa4.98□□□□□ -1.61
SCM3YDL139C YMR111CQ04461 462 aaPredicted RBP4.98□□□□□ -1.61
SCM3YDL139C GAD1Q04792 585 aa4.98□□□□□ -1.61
SCM3YDL139C BLS1Q06071 122 aa4.98□□□□□ -1.61
SCM3YDL139C VHS3Q08438 674 aa4.98□□□□□ -1.61
SCM3YDL139C YOR378WQ08902 515 aa4.98□□□□□ -1.61
SCM3YDL139C MLH3Q12083 715 aa4.98□□□□□ -1.61
SCM3YDL139C HUA2Q12134 243 aa4.98□□□□□ -1.61
SCM3YDL139C TRM13Q12383 476 aa4.98□□□□□ -1.61
SCM3YDL139C TRP4P07285 380 aaPredicted RBP4.97□□□□□ -1.61
SCM3YDL139C SCH9P11792 824 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C SST2P11972 698 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C HSC82P15108 705 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C DAL81P21657 970 aa4.97□□□□□ -1.61
SCM3YDL139C TRX2P22803 104 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C TFC3P34111 1160 aa4.97□□□□□ -1.61
SCM3YDL139C APT2P36973 181 aa4.97□□□□□ -1.61
SCM3YDL139C MED6P38782 295 aa4.97□□□□□ -1.61
SCM3YDL139C HEM14P40012 539 aa4.97□□□□□ -1.61
SCM3YDL139C AZF1P41696 914 aa4.97□□□□□ -1.61
SCM3YDL139C MRX6P48564 524 aa4.97□□□□□ -1.61
SCM3YDL139C NBP35P52920 328 aa4.97□□□□□ -1.61
SCM3YDL139C SLD3P53135 668 aa4.97□□□□□ -1.61
SCM3YDL139C COG2P53271 262 aa4.97□□□□□ -1.61
SCM3YDL139C YPL014WQ02606 381 aa4.97□□□□□ -1.61
SCM3YDL139C PET117Q02771 107 aa4.97□□□□□ -1.61
SCM3YDL139C SEG1Q04279 960 aa4.97□□□□□ -1.61
SCM3YDL139C MCP2Q06567 569 aa4.97□□□□□ -1.61
SCM3YDL139C VPS36Q06696 566 aa4.97□□□□□ -1.61
SCM3YDL139C STP4Q07351 490 aa4.97□□□□□ -1.61
SCM3YDL139C VAM6Q07468 1049 aa4.97□□□□□ -1.61
SCM3YDL139C HBT1Q07653 1046 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C YLR012CQ07927 99 aa4.97□□□□□ -1.61
SCM3YDL139C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
SCM3YDL139C APC5Q08683 685 aa4.97□□□□□ -1.61
SCM3YDL139C SPE3Q12074 293 aaKnown RBP4.97□□□□□ -1.61
SCM3YDL139C HOS1Q12214 470 aa4.97□□□□□ -1.61
SCM3YDL139C JLP1Q12358 412 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms