RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C NDD1Q08887 554 aa2.05□□□□□ -2.08
BRE1YDL074C ATG29Q12092 213 aa2.05□□□□□ -2.08
BRE1YDL074C YOR342CQ12182 319 aa2.05□□□□□ -2.08
BRE1YDL074C GLE1Q12315 538 aa2.05□□□□□ -2.08
BRE1YDL074C YVC1Q12324 675 aa2.05□□□□□ -2.08
BRE1YDL074C RMD5Q12508 421 aa2.05□□□□□ -2.08
BRE1YDL074C MHF1Q3E835 90 aa2.05□□□□□ -2.08
BRE1YDL074C YPR053CQ6Q5F3 151 aa2.05□□□□□ -2.08
BRE1YDL074C RIB3Q99258 208 aa2.05□□□□□ -2.08
BRE1YDL074C MED11Q99278 115 aa2.05□□□□□ -2.08
BRE1YDL074C YLR149CQ99296 730 aa2.05□□□□□ -2.08
BRE1YDL074C SUC2P00724 532 aa2.05□□□□□ -2.08
BRE1YDL074C TPK3P05986 398 aa2.05□□□□□ -2.08
BRE1YDL074C SWI5P08153 709 aa2.05□□□□□ -2.08
BRE1YDL074C YKR104WP0CE69 306 aa2.05□□□□□ -2.08
BRE1YDL074C RAP1P11938 827 aa2.05□□□□□ -2.08
BRE1YDL074C GAL3P13045 520 aa2.05□□□□□ -2.08
BRE1YDL074C ARF2P19146 181 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C PHO3P24031 467 aa2.05□□□□□ -2.08
BRE1YDL074C GRR1P24814 1151 aa2.05□□□□□ -2.08
BRE1YDL074C FUN30P31380 1131 aa2.05□□□□□ -2.08
BRE1YDL074C SSH4P32343 579 aa2.05□□□□□ -2.08
BRE1YDL074C PUP2P32379 260 aa2.05□□□□□ -2.08
BRE1YDL074C SSO1P32867 290 aa2.05□□□□□ -2.08
BRE1YDL074C PHO11P35842 467 aa2.05□□□□□ -2.08
BRE1YDL074C TEF4P36008 412 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C SIF2P38262 535 aa2.05□□□□□ -2.08
BRE1YDL074C YBR138CP38277 524 aa2.05□□□□□ -2.08
BRE1YDL074C SIC1P38634 284 aa2.05□□□□□ -2.08
BRE1YDL074C PHO12P38693 467 aa2.05□□□□□ -2.08
BRE1YDL074C PCL5P38794 229 aa2.05□□□□□ -2.08
BRE1YDL074C DUN1P39009 513 aa2.05□□□□□ -2.08
BRE1YDL074C YAR028WP39548 234 aa2.05□□□□□ -2.08
BRE1YDL074C GIP4P39732 760 aa2.05□□□□□ -2.08
BRE1YDL074C ECM10P39987 644 aa2.05□□□□□ -2.08
BRE1YDL074C GIM4P40005 111 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C TPA1P40032 644 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C DDI1P40087 428 aa2.05□□□□□ -2.08
BRE1YDL074C NDE1P40215 560 aa2.05□□□□□ -2.08
BRE1YDL074C KTR7P40504 517 aa2.05□□□□□ -2.08
BRE1YDL074C RPL34BP40525 121 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C YIR016WP40572 265 aa2.05□□□□□ -2.08
BRE1YDL074C RMD8P43620 662 aa2.05□□□□□ -2.08
BRE1YDL074C STB2P46679 850 aa2.05□□□□□ -2.08
BRE1YDL074C BNA3P47039 444 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C AIM22P47051 409 aa2.05□□□□□ -2.08
BRE1YDL074C SDT1P53078 280 aa2.05□□□□□ -2.08
BRE1YDL074C YGR015CP53208 328 aa2.05□□□□□ -2.08
BRE1YDL074C TWF1P53250 332 aa2.05□□□□□ -2.08
BRE1YDL074C YNR021WP53723 404 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C CIK1Q01649 594 aa2.05□□□□□ -2.08
BRE1YDL074C PIR1Q03178 341 aa2.05□□□□□ -2.08
BRE1YDL074C RPN4Q03465 531 aa2.05□□□□□ -2.08
BRE1YDL074C MUS81Q04149 632 aaPredicted RBP2.05□□□□□ -2.08
BRE1YDL074C YMR111CQ04461 462 aaPredicted RBP2.05□□□□□ -2.08
BRE1YDL074C ARP10Q04549 284 aa2.05□□□□□ -2.08
BRE1YDL074C GAD1Q04792 585 aa2.05□□□□□ -2.08
BRE1YDL074C YHC1Q05900 231 aaKnown RBP2.05□□□□□ -2.08
BRE1YDL074C GPI11Q06636 219 aa2.05□□□□□ -2.08
BRE1YDL074C NSE1Q07913 336 aa2.05□□□□□ -2.08
BRE1YDL074C IRC10Q08118 586 aa2.05□□□□□ -2.08
BRE1YDL074C JLP1Q12358 412 aa2.05□□□□□ -2.08
BRE1YDL074C CET1O13297 549 aaPredicted RBP2.04□□□□□ -2.08
BRE1YDL074C AI1P03875 834 aa2.04□□□□□ -2.08
BRE1YDL074C REV1P12689 985 aa2.04□□□□□ -2.08
BRE1YDL074C GUK1P15454 187 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C PRI2P20457 528 aa2.04□□□□□ -2.08
BRE1YDL074C SGV1P23293 657 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C YJU2P28320 278 aaPredicted RBP2.04□□□□□ -2.08
BRE1YDL074C CTS1P29029 562 aa2.04□□□□□ -2.08
BRE1YDL074C ARP2P32381 391 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C HIR2P32480 875 aa2.04□□□□□ -2.08
BRE1YDL074C NUP2P32499 720 aa2.04□□□□□ -2.08
BRE1YDL074C TFB1P32776 642 aa2.04□□□□□ -2.08
BRE1YDL074C MRPL6P32904 214 aa2.04□□□□□ -2.08
BRE1YDL074C ATO2P32907 282 aa2.04□□□□□ -2.08
BRE1YDL074C STE5P32917 917 aa2.04□□□□□ -2.08
BRE1YDL074C HCS1P34243 683 aa2.04□□□□□ -2.08
BRE1YDL074C RMA1P36001 430 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C NTR2P36118 322 aaPredicted RBP2.04□□□□□ -2.08
BRE1YDL074C ECM4P36156 370 aa2.04□□□□□ -2.08
BRE1YDL074C RIB1P38066 345 aa2.04□□□□□ -2.08
BRE1YDL074C MUM2P38236 366 aa2.04□□□□□ -2.08
BRE1YDL074C IML3P38265 245 aa2.04□□□□□ -2.08
BRE1YDL074C TSL1P38427 1098 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C RCK1P38622 512 aa2.04□□□□□ -2.08
BRE1YDL074C OSH7P38755 437 aa2.04□□□□□ -2.08
BRE1YDL074C NEM1P38757 446 aa2.04□□□□□ -2.08
BRE1YDL074C SKN7P38889 622 aa2.04□□□□□ -2.08
BRE1YDL074C AXL2P38928 823 aa2.04□□□□□ -2.08
BRE1YDL074C ISC1P40015 477 aaKnown RBP2.04□□□□□ -2.08
BRE1YDL074C FMP10P40098 244 aa2.04□□□□□ -2.08
BRE1YDL074C OSW5P40219 148 aa2.04□□□□□ -2.08
BRE1YDL074C PAN6P40459 309 aa2.04□□□□□ -2.08
BRE1YDL074C MEP2P41948 499 aa2.04□□□□□ -2.08
BRE1YDL074C YGL176CP46945 554 aa2.04□□□□□ -2.08
BRE1YDL074C YJR030CP47101 745 aa2.04□□□□□ -2.08
BRE1YDL074C BIR1P47134 954 aa2.04□□□□□ -2.08
BRE1YDL074C GCV1P48015 400 aa2.04□□□□□ -2.08
BRE1YDL074C ATP22P50273 684 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms