RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	ERR1	P0CX10	437 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ERR2	P0CX11	437 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PET54	P10834	293 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	LAT1	P12695	482 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	GLK1	P17709	500 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	AAC3	P18238	307 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	APA2	P22108	325 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YCK1	P23291	538 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PRP28	P23394	588 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	RPL24B	P24000	155 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	SED4	P25365	1065 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	DMC1	P25453	334 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YCL049C	P25577	312 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	CSM1	P25651	190 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	UBC8	P28263	218 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	URA7	P28274	579 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	PET127	P32606	800 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PEX2	P32800	271 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	RGT1	P32862	1170 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	SPT10	P35208	640 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YPT52	P36018	234 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	TFA2	P36145	328 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ABZ1	P37254	787 aa	Predicted RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	APM3	P38153	483 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	SAF1	P38352	637 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	BIG1	P38813	335 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
VBA2	YBR293W	SHU2	P38957	223 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ERP2	P39704	215 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	GIP4	P39732	760 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	RMD6	P39975	231 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PIC2	P40035	300 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PEP8	P40335	379 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	COX16	P47081	118 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ECM27	P47144	725 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YJR124C	P47159	448 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	UPF3	P48412	387 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	PMT5	P52867	743 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	IMA1	P53051	589 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	CLD1	P53264	445 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PBP1	P53297	722 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	HHO1	P53551	258 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YNR029C	P53729	429 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	NOG2	P53742	486 aa	Known RBP	4.36	□□□□□ -1.71
VBA2	YBR293W	YNL095C	P53932	642 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	SIW14	P53965	281 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	PRM6	Q04705	352 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	NEJ1	Q06148	342 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	GRS2	Q06817	618 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ZEO1	Q08245	113 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	HAL9	Q12180	1030 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	YLR122C	Q12312	125 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	TRM10	Q12400	293 aa		4.36	□□□□□ -1.71
VBA2	YBR293W	ARG3	P05150	338 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	TPK1	P06244	397 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	RAD7	P06779	565 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YEL076C-A	P0CX16	216 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YLR464W	P0CX17	216 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ENA1	P13587	1091 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	FRS1	P15624	595 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	MET16	P18408	261 aa	Predicted RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	CCA1	P21269	546 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
VBA2	YBR293W	ERG6	P25087	383 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	SRO9	P25567	434 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	NDC1	P32500	655 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YKL077W	P36081	392 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	CAF4	P36130	643 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	SPC34	P36131	295 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	NOP4	P37838	685 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	ECM8	P38246	354 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YBR184W	P38299	523 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YMR262W	P38430	313 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ARN2	P38724	620 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	RRP4	P38792	359 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	CYC2	P38909	366 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	IPT1	P38954	527 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	PTI1	P39927	425 aa	Predicted RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	YEL076C	P39971	216 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	NOP16	P40007	231 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	FMP10	P40098	244 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	PIG2	P40187	538 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YIL054W	P40524	105 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	CIN1	P40987	1014 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ERG10	P41338	398 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	YJR030C	P47101	745 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	SPC98	P53540	846 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	MNT4	P53745	580 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	CUS2	P53830	285 aa	Predicted RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
VBA2	YBR293W	YNL033W	P53964	284 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	YNL019C	P53975	284 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ENA2	Q01896	1091 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	HSP31	Q04432	237 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	MYO5	Q04439	1219 aa	Known RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	MFB1	Q04922	465 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ARO10	Q06408	635 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	ISA1	Q07821	250 aa	Predicted RBP	4.35	□□□□□ -1.71
VBA2	YBR293W	NSL1	Q12143	216 aa		4.35	□□□□□ -1.71
VBA2	YBR293W	REC8	Q12188	680 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 108.4 ms