RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C HNM1P19807 563 aa3.14□□□□□ -1.91
SHG1YBR258C SGV1P23293 657 aaKnown RBP3.14□□□□□ -1.91
SHG1YBR258C RAD24P32641 659 aa3.14□□□□□ -1.91
SHG1YBR258C NPL6P32832 435 aa3.14□□□□□ -1.91
SHG1YBR258C SEC66P33754 206 aa3.14□□□□□ -1.91
SHG1YBR258C YKL023WP36103 277 aaKnown RBP3.14□□□□□ -1.91
SHG1YBR258C MET30P39014 640 aa3.14□□□□□ -1.91
SHG1YBR258C YIL169CP40442 995 aa3.14□□□□□ -1.91
SHG1YBR258C MET18P40469 1032 aa3.14□□□□□ -1.91
SHG1YBR258C ALK1P43633 760 aaKnown RBP3.14□□□□□ -1.91
SHG1YBR258C ATG27P46989 271 aa3.14□□□□□ -1.91
SHG1YBR258C AIM22P47051 409 aa3.14□□□□□ -1.91
SHG1YBR258C ALT2P52892 507 aa3.14□□□□□ -1.91
SHG1YBR258C YGR126WP53274 230 aa3.14□□□□□ -1.91
SHG1YBR258C COQ9Q05779 260 aa3.14□□□□□ -1.91
SHG1YBR258C SSK1Q07084 712 aa3.14□□□□□ -1.91
SHG1YBR258C THI20Q08224 551 aa3.14□□□□□ -1.91
SHG1YBR258C ARG3P05150 338 aa3.13□□□□□ -1.91
SHG1YBR258C PEP5P12868 1029 aa3.13□□□□□ -1.91
SHG1YBR258C EST1P17214 699 aaPredicted RBP3.13□□□□□ -1.91
SHG1YBR258C PRP2P20095 876 aaPredicted RBP3.13□□□□□ -1.91
SHG1YBR258C MCM4P30665 933 aaKnown RBP3.13□□□□□ -1.91
SHG1YBR258C UBP11P36026 717 aa3.13□□□□□ -1.91
SHG1YBR258C MIC60P36112 540 aa3.13□□□□□ -1.91
SHG1YBR258C CST26P38226 397 aa3.13□□□□□ -1.91
SHG1YBR258C RTR1P40084 226 aaPredicted RBP3.13□□□□□ -1.91
SHG1YBR258C ARF3P40994 183 aaRIP-Chip data3.13□□□□□ -1.91not detected
SHG1YBR258C SNG1P46950 547 aa3.13□□□□□ -1.91
SHG1YBR258C PET130P47065 347 aa3.13□□□□□ -1.91
SHG1YBR258C SCS3P53012 380 aa3.13□□□□□ -1.91
SHG1YBR258C SMM1P53720 384 aaKnown RBP3.13□□□□□ -1.91
SHG1YBR258C DIG1Q03063 452 aaKnown RBP3.13□□□□□ -1.91
SHG1YBR258C MSS11Q03825 758 aa3.13□□□□□ -1.91
SHG1YBR258C TAF11Q04226 346 aa3.13□□□□□ -1.91
SHG1YBR258C FMP42Q04991 504 aa3.13□□□□□ -1.91
SHG1YBR258C MRD1Q06106 887 aaKnown RBP3.13□□□□□ -1.91
SHG1YBR258C DIC1Q06143 298 aa3.13□□□□□ -1.91
SHG1YBR258C CDC45Q08032 650 aa3.13□□□□□ -1.91
SHG1YBR258C SEC39Q12745 709 aa3.13□□□□□ -1.91
SHG1YBR258C PGA3Q12746 312 aaKnown RBP3.13□□□□□ -1.91
SHG1YBR258C SWI1P09547 1314 aa3.13□□□□□ -1.91
SHG1YBR258C SUC2P00724 532 aa3.12□□□□□ -1.91
SHG1YBR258C GAL80P04387 435 aa3.12□□□□□ -1.91
SHG1YBR258C BAR1P12630 587 aa3.12□□□□□ -1.91
SHG1YBR258C CKA1P15790 372 aa3.12□□□□□ -1.91
SHG1YBR258C VMA2P16140 517 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C PDA1P16387 420 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C ROX1P25042 368 aa3.12□□□□□ -1.91
SHG1YBR258C PEP3P27801 918 aa3.12□□□□□ -1.91
SHG1YBR258C SEC1P30619 724 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C ACH1P32316 526 aa3.12□□□□□ -1.91
SHG1YBR258C ECM15P35195 104 aa3.12□□□□□ -1.91
SHG1YBR258C ROT2P38138 954 aa3.12□□□□□ -1.91
SHG1YBR258C MSR1P38714 643 aa3.12□□□□□ -1.91
SHG1YBR258C YPT35P38815 214 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C MAF1P41910 395 aa3.12□□□□□ -1.91
SHG1YBR258C CUL3P53202 744 aa3.12□□□□□ -1.91
SHG1YBR258C MRPL19P53875 158 aa3.12□□□□□ -1.91
SHG1YBR258C IPI3P53877 555 aa3.12□□□□□ -1.91
SHG1YBR258C SLG1P54867 378 aa3.12□□□□□ -1.91
SHG1YBR258C RPT6Q01939 405 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C TOF2Q02208 771 aa3.12□□□□□ -1.91
SHG1YBR258C YPL014WQ02606 381 aa3.12□□□□□ -1.91
SHG1YBR258C SMA1Q02651 245 aa3.12□□□□□ -1.91
SHG1YBR258C PNG1Q02890 363 aa3.12□□□□□ -1.91
SHG1YBR258C HCR1Q05775 265 aaKnown RBP3.12□□□□□ -1.91
SHG1YBR258C GRS2Q06817 618 aa3.12□□□□□ -1.91
SHG1YBR258C TAH18Q12181 623 aa3.12□□□□□ -1.91
SHG1YBR258C SCM3Q12334 223 aa3.12□□□□□ -1.91
SHG1YBR258C MEC1P38111 2368 aa3.12□□□□□ -1.91
SHG1YBR258C FKS1P38631 1876 aaKnown RBP3.11□□□□□ -1.91
SHG1YBR258C MYO1P08964 1928 aa3.11□□□□□ -1.91
SHG1YBR258C AMD1P15274 810 aaKnown RBP3.11□□□□□ -1.91
SHG1YBR258C GLN3P18494 730 aa3.11□□□□□ -1.91
SHG1YBR258C YCR007CP25354 239 aa3.11□□□□□ -1.91
SHG1YBR258C ERG1P32476 496 aaKnown RBP3.11□□□□□ -1.91
SHG1YBR258C SHP1P34223 423 aa3.11□□□□□ -1.91
SHG1YBR258C VID24P38263 362 aa3.11□□□□□ -1.91
SHG1YBR258C BZZ1P38822 633 aa3.11□□□□□ -1.91
SHG1YBR258C TIF4631P39935 952 aaKnown RBP3.11□□□□□ -1.91
SHG1YBR258C CSM2P40465 213 aa3.11□□□□□ -1.91
SHG1YBR258C TWF1P53250 332 aa3.11□□□□□ -1.91
SHG1YBR258C BUD32P53323 261 aa3.11□□□□□ -1.91
SHG1YBR258C SAM50P53969 484 aa3.11□□□□□ -1.91
SHG1YBR258C HEF3P53978 1044 aaKnown RBP3.11□□□□□ -1.91
SHG1YBR258C RPM2Q02773 1202 aa3.11□□□□□ -1.91
SHG1YBR258C SHR3Q02774 210 aa3.11□□□□□ -1.91
SHG1YBR258C TAP42Q04372 366 aa3.11□□□□□ -1.91
SHG1YBR258C BNA5Q05979 453 aa3.11□□□□□ -1.91
SHG1YBR258C ATG29Q12092 213 aa3.11□□□□□ -1.91
SHG1YBR258C YDL007C-AQ2V2Q0 85 aa3.11□□□□□ -1.91
SHG1YBR258C MSB2P32334 1306 aa3.11□□□□□ -1.91
SHG1YBR258C FOB1O13329 566 aa3.1□□□□□ -1.91
SHG1YBR258C RAD52P06778 471 aaKnown RBP3.1□□□□□ -1.91
SHG1YBR258C PAP1P29468 568 aaKnown RBP3.1□□□□□ -1.91
SHG1YBR258C ERG3P32353 365 aa3.1□□□□□ -1.91
SHG1YBR258C NFU1P32860 256 aa3.1□□□□□ -1.91
SHG1YBR258C YBL028CP38202 106 aa3.1□□□□□ -1.91
SHG1YBR258C TCM62P38228 572 aaKnown RBP3.1□□□□□ -1.91
SHG1YBR258C AXL1P40851 1208 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms