RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	DON1	Q05610	365 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	COS7	Q07788	383 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	YLR278C	Q05854	1341 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	CAR1	P00812	333 aa	Known RBP	4.45	□□□□□ -1.7
YPK3	YBR028C	GEX1	P25596	615 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	ATS1	P31386	333 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	PRP21	P32524	280 aa	Predicted RBP	4.45	□□□□□ -1.7
YPK3	YBR028C	ARA1	P38115	344 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	ZIM17	P42844	174 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	YGL138C	P53122	345 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	IRC15	Q02733	499 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	DAP1	Q12091	152 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	VAM3	Q12241	283 aa		4.45	□□□□□ -1.7
YPK3	YBR028C	LEU4	P06208	619 aa	Known RBP	4.44	□□□□□ -1.7
YPK3	YBR028C	PXA2	P34230	853 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	VHC1	P38329	1120 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	CAK1	P43568	368 aa	Predicted RBP	4.44	□□□□□ -1.7
YPK3	YBR028C	MDM30	Q05930	598 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	EXO70	P19658	623 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	NDC1	P32500	655 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	TFB1	P32776	642 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	GYP6	P32806	458 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	NTC20	P38302	140 aa	Predicted RBP	4.44	□□□□□ -1.7
YPK3	YBR028C	RRT2	P38332	387 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	YJL070C	P40361	888 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	SKO1	Q02100	647 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	GRS2	Q06817	618 aa		4.44	□□□□□ -1.7
YPK3	YBR028C	CPR2	P23285	205 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	SIN4	P32259	974 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	HIR2	P32480	875 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	PTR2	P32901	601 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	CBP4	P37267	147 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	RFC3	P38629	340 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	HAT2	P39984	401 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	SNM1	P40993	198 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	GWT1	P47026	490 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	ART5	P53244	586 aa	Known RBP	4.43	□□□□□ -1.7
YPK3	YBR028C	ARK1	P53974	638 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	VPS74	Q06385	345 aa		4.43	□□□□□ -1.7
YPK3	YBR028C	RPL15A	P05748	204 aa	Known RBP	4.42	□□□□□ -1.7
YPK3	YBR028C	KRE2	P27809	442 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	LOS1	P33418	1100 aa	Predicted RBP	4.42	□□□□□ -1.7
YPK3	YBR028C	SLM4	P38247	162 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	LRP1	P38801	184 aa	Known RBP	4.42	□□□□□ -1.7
YPK3	YBR028C	TRS85	P46944	698 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	RTT101	P47050	842 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	NCS2	P53923	493 aa	Predicted RBP	4.42	□□□□□ -1.7
YPK3	YBR028C	ACL4	Q03771	387 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	MMR1	Q06324	491 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	NDD1	Q08887	554 aa		4.42	□□□□□ -1.7
YPK3	YBR028C	SNU66	Q12420	587 aa	Predicted RBP	4.42	□□□□□ -1.7
YPK3	YBR028C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
YPK3	YBR028C	URA4	P20051	364 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	BEM1	P29366	551 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	FRE2	P36033	711 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	APE3	P37302	537 aa	Known RBP	4.41	□□□□□ -1.7
YPK3	YBR028C	MTC4	P38335	694 aa	Known RBP	4.41	□□□□□ -1.7
YPK3	YBR028C	RPR2	P40571	144 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	SAS2	P40963	338 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	GCD10	P41814	478 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	RPS0B	P46654	252 aa	Known RBP	4.41	□□□□□ -1.7
YPK3	YBR028C	HSP31	Q04432	237 aa		4.41	□□□□□ -1.7
YPK3	YBR028C	RKM1	Q08961	583 aa	Predicted RBP	4.41	□□□□□ -1.7
YPK3	YBR028C	MTF1	P14908	341 aa	Known RBP	4.4	□□□□□ -1.7
YPK3	YBR028C	SPC110	P32380	944 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	REC114	P32841	428 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	ISC1	P40015	477 aa	Known RBP	4.4	□□□□□ -1.7
YPK3	YBR028C	SHO1	P40073	367 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	ECM27	P47144	725 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	OGG1	P53397	376 aa	Predicted RBP	4.4	□□□□□ -1.7
YPK3	YBR028C	YDR387C	Q04162	555 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	AYT1	Q12226	474 aa		4.4	□□□□□ -1.7
YPK3	YBR028C	HIP1	P06775	603 aa		4.4	□□□□□ -1.71
YPK3	YBR028C	CLN1	P20437	546 aa		4.4	□□□□□ -1.71
YPK3	YBR028C	DHH1	P39517	506 aa	Known RBP	4.4	□□□□□ -1.71
YPK3	YBR028C	SER3	P40054	469 aa		4.4	□□□□□ -1.71
YPK3	YBR028C	ELP2	P42935	788 aa		4.4	□□□□□ -1.71
YPK3	YBR028C	ERP1	Q05359	219 aa	Known RBP	4.4	□□□□□ -1.71
YPK3	YBR028C	DIS3	Q08162	1001 aa	Known RBP	4.4	□□□□□ -1.71
YPK3	YBR028C	RHB1	P25378	209 aa		4.39	□□□□□ -1.71
YPK3	YBR028C	PCP1	P53259	346 aa		4.39	□□□□□ -1.71
YPK3	YBR028C	CIK1	Q01649	594 aa		4.39	□□□□□ -1.71
YPK3	YBR028C	YMR130W	Q04223	302 aa		4.39	□□□□□ -1.71
YPK3	YBR028C	HEM2	P05373	342 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	SRV2	P17555	526 aa	Known RBP	4.38	□□□□□ -1.71
YPK3	YBR028C	RPI1	P23250	407 aa	Known RBP	4.38	□□□□□ -1.71
YPK3	YBR028C	BRF1	P29056	596 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	ECM25	P32525	599 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	RPH1	P39956	796 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	YFR016C	P43597	1233 aa	Known RBP	4.38	□□□□□ -1.71
YPK3	YBR028C	YJR011C	P47086	261 aa	Predicted RBP	4.38	□□□□□ -1.71
YPK3	YBR028C	DSL1	P53847	754 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	HOT1	Q03213	719 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	YMR317W	Q04893	1140 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	GPM3	Q12326	303 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	HSP42	Q12329	375 aa		4.38	□□□□□ -1.71
YPK3	YBR028C	TY1B-A	O13527	1196 aa	Known RBP	4.37	□□□□□ -1.71
YPK3	YBR028C	RPL20A	P0CX23	172 aa	Known RBP	4.37	□□□□□ -1.71
YPK3	YBR028C	RPL20B	P0CX24	172 aa	Predicted RBP	4.37	□□□□□ -1.71
YPK3	YBR028C	CDC60	P26637	1090 aa	Known RBP	4.37	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms