RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C RPS6BP0CX38 236 aaPredicted RBP7.13□□□□□ -1.27
CCR4YAL021C RPL35AP0CX84 120 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C RPL35BP0CX85 120 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C RNA14P25298 677 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C RRP7P25368 297 aaPredicted RBP7.13□□□□□ -1.27
CCR4YAL021C PTP2P29461 750 aa7.13□□□□□ -1.27
CCR4YAL021C LST4P34239 828 aa7.13□□□□□ -1.27
CCR4YAL021C RBG1P39729 369 aa7.13□□□□□ -1.27
CCR4YAL021C PHM8P40025 321 aa7.13□□□□□ -1.27
CCR4YAL021C ART5P53244 586 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C COQ6P53318 479 aa7.13□□□□□ -1.27
CCR4YAL021C ALD6P54115 500 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C CDA1Q06702 301 aa7.13□□□□□ -1.27
CCR4YAL021C LDB18Q07887 179 aa7.13□□□□□ -1.27
CCR4YAL021C THI21Q08975 551 aa7.13□□□□□ -1.27
CCR4YAL021C FAL1Q12099 399 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C YPL150WQ12152 901 aa7.13□□□□□ -1.27
CCR4YAL021C YPR063CQ12160 140 aa7.13□□□□□ -1.27
CCR4YAL021C RRG1Q12167 365 aaPredicted RBP7.13□□□□□ -1.27
CCR4YAL021C TMA17Q12513 150 aa7.13□□□□□ -1.27
CCR4YAL021C PET54P10834 293 aa7.13□□□□□ -1.27
CCR4YAL021C SAR1P20606 190 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C RER1P25560 188 aa7.13□□□□□ -1.27
CCR4YAL021C VMA5P31412 392 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C UTR4P32626 227 aa7.13□□□□□ -1.27
CCR4YAL021C SRP102P36057 244 aaPredicted RBP7.13□□□□□ -1.27
CCR4YAL021C MRPL3P36516 390 aa7.13□□□□□ -1.27
CCR4YAL021C PDX3P38075 228 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C EMC2P47133 292 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C PYK2P52489 506 aaKnown RBP7.13□□□□□ -1.27
CCR4YAL021C YGL204CP53089 101 aa7.13□□□□□ -1.27
CCR4YAL021C NRD1P53617 575 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
CCR4YAL021C YPL080CQ02826 108 aa7.13□□□□□ -1.27
CCR4YAL021C MRX10Q05648 414 aa7.13□□□□□ -1.27
CCR4YAL021C THI7Q05998 598 aa7.13□□□□□ -1.27
CCR4YAL021C MFG1Q07684 458 aa7.13□□□□□ -1.27
CCR4YAL021C YDL176WQ12027 708 aa7.13□□□□□ -1.27
CCR4YAL021C WIP1Q2V2P8 89 aa7.13□□□□□ -1.27
CCR4YAL021C RPP2AP05319 106 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C RFA1P22336 621 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C GRR1P24814 1151 aa7.12□□□□□ -1.27
CCR4YAL021C IMG2P25642 146 aaPredicted RBP7.12□□□□□ -1.27
CCR4YAL021C BEM1P29366 551 aa7.12□□□□□ -1.27
CCR4YAL021C GLN1P32288 370 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C SPO23P33757 523 aa7.12□□□□□ -1.27
CCR4YAL021C POP4P38336 279 aa7.12□□□□□ -1.27
CCR4YAL021C SHG1P38337 142 aa7.12□□□□□ -1.27
CCR4YAL021C NPR2P39923 615 aa7.12□□□□□ -1.27
CCR4YAL021C MET28P40573 187 aa7.12□□□□□ -1.27
CCR4YAL021C IRC7P43623 340 aa7.12□□□□□ -1.27
CCR4YAL021C PUS4P48567 403 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C CUE3P53137 624 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C YML037CQ03703 340 aa7.12□□□□□ -1.27
CCR4YAL021C NHX1Q04121 633 aa7.12□□□□□ -1.27
CCR4YAL021C HDA2Q06629 674 aa7.12□□□□□ -1.27
CCR4YAL021C YOR111WQ99210 232 aa7.12□□□□□ -1.27
CCR4YAL021C RAD7P06779 565 aa7.12□□□□□ -1.27
CCR4YAL021C MAS2P11914 482 aa7.12□□□□□ -1.27
CCR4YAL021C AFT1P22149 690 aa7.12□□□□□ -1.27
CCR4YAL021C PRE7P23724 241 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C ARO7P32178 256 aa7.12□□□□□ -1.27
CCR4YAL021C REF2P42073 533 aaPredicted RBP7.12□□□□□ -1.27
CCR4YAL021C PTK2P47116 818 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C ERV14P53173 138 aa7.12□□□□□ -1.27
CCR4YAL021C TNA1P53322 534 aa7.12□□□□□ -1.27
CCR4YAL021C YNR029CP53729 429 aaKnown RBP7.12□□□□□ -1.27
CCR4YAL021C YCL001W-AP87012 153 aa7.12□□□□□ -1.27
CCR4YAL021C SLD5Q03406 294 aa7.12□□□□□ -1.27
CCR4YAL021C YPR127WQ06494 345 aa7.12□□□□□ -1.27
CCR4YAL021C YNG1Q08465 219 aa7.12□□□□□ -1.27
CCR4YAL021C YDR061WQ12298 539 aa7.12□□□□□ -1.27
CCR4YAL021C PHO4P07270 312 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C UNG1P12887 359 aa7.11□□□□□ -1.27
CCR4YAL021C EMC1P25574 760 aa7.11□□□□□ -1.27
CCR4YAL021C SHP1P34223 423 aa7.11□□□□□ -1.27
CCR4YAL021C CBT1P36038 271 aaPredicted RBP7.11□□□□□ -1.27
CCR4YAL021C EXO1P39875 702 aa7.11□□□□□ -1.27
CCR4YAL021C PSF2P40359 213 aa7.11□□□□□ -1.27
CCR4YAL021C PFA3P42836 336 aa7.11□□□□□ -1.27
CCR4YAL021C GUF1P46943 645 aa7.11□□□□□ -1.27
CCR4YAL021C CWC23P52868 283 aaPredicted RBP7.11□□□□□ -1.27
CCR4YAL021C GUP1P53154 560 aa7.11□□□□□ -1.27
CCR4YAL021C TUB4P53378 473 aa7.11□□□□□ -1.27
CCR4YAL021C PRM15Q03262 622 aa7.11□□□□□ -1.27
CCR4YAL021C FUM1P08417 488 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C RPP1BP10622 106 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C MTF1P14908 341 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C SRM1P21827 482 aa7.11□□□□□ -1.27
CCR4YAL021C YBR032WP38223 100 aa7.11□□□□□ -1.27
CCR4YAL021C FAA3P39002 694 aa7.11□□□□□ -1.27
CCR4YAL021C YEL025CP39991 1188 aa7.11□□□□□ -1.27
CCR4YAL021C PFK26P40433 827 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C NIT1P40447 199 aa7.11□□□□□ -1.27
CCR4YAL021C CFD1P40558 293 aa7.11□□□□□ -1.27
CCR4YAL021C TPN1P53099 579 aa7.11□□□□□ -1.27
CCR4YAL021C SSU72P53538 206 aaPredicted RBP7.11□□□□□ -1.27
CCR4YAL021C YNR021WP53723 404 aaKnown RBP7.11□□□□□ -1.27
CCR4YAL021C COQ9Q05779 260 aa7.11□□□□□ -1.27
CCR4YAL021C TMA10Q06177 86 aa7.11□□□□□ -1.27
CCR4YAL021C NBA1Q08229 501 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms