RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 PGM5Q15124 567 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 PDCD2LQ9BRP1 358 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 GJB2P29033 226 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 CNGA1P29973 690 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 CUL4AQ13619 759 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 SNX21Q969T3 373 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 LLPHQ9BRT6 129 aaKnown RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
SCARB2-222ENST00000640634 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
SCARB2-222ENST00000640634 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 ESYT2A0FGR8 921 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 RGS20O76081 388 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 NR3C2P08235 984 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 ADCYAP1R1P41586 468 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
SCARB2-222ENST00000640634 NR5A1Q13285 461 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
SCARB2-222ENST00000640634 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 DNERQ8NFT8 737 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
SCARB2-222ENST00000640634 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-222ENST00000640634 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCARB2-222ENST00000640634 RNF208Q9H0X6 261 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
SCARB2-222ENST00000640634 FRMPD3Q5JV73 1810 aa12.52□□□□□ -0.4
SCARB2-222ENST00000640634 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 M0R2N6 131 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 EDIL3O43854 480 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 SORBS3O60504 671 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 CAPN15O75808 1086 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 ARIH2O95376 493 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
SCARB2-222ENST00000640634 SOX10P56693 466 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 KRT40Q6A162 431 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
SCARB2-222ENST00000640634 DEFB118Q96PH6 123 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 UIMC1Q96RL1 719 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 PCDHA4Q9UN74 947 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
SCARB2-222ENST00000640634 ASB14A6NK59 587 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 CYP2W1Q8TAV3 490 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-222ENST00000640634 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-222ENST00000640634 PAK6Q9NQU5 681 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-222ENST00000640634 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
SCARB2-222ENST00000640634 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 MMP1P03956 469 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 LHX8Q68G74 356 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
SCARB2-222ENST00000640634 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 WASF1Q92558 559 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 COPS5Q92905 334 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 C8orf76Q96K31 380 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
SCARB2-222ENST00000640634 MYH7BA7E2Y1 1941 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
SCARB2-222ENST00000640634 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 WNT7AO00755 349 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 SMPD1P17405 629 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 GNA11P29992 359 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SCARB2-222ENST00000640634 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 DIS3L2Q8IYB7 885 aaKnown RBP12.5□□□□□ -0.41
SCARB2-222ENST00000640634 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
SCARB2-222ENST00000640634 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 SEPT4O43236 478 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 ITGB5P18084 799 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
SCARB2-222ENST00000640634 CCND2P30279 289 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms