RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 LOC102724159A0A0B4J2E5 919 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 FDPSP14324 419 aaKnown RBP16.86■□□□□ 0.29
PNKP-221ENST00000627317 EDNRBP24530 442 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 GNA11P29992 359 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 ADCYAP1R1P41586 468 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 FOSBP53539 338 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 CUL4AQ13619 759 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 TRIM29Q14134 588 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 PWP2Q15269 919 aaKnown RBP16.86■□□□□ 0.29
PNKP-221ENST00000627317 UBE2SQ16763 222 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 USP17L6PQ6QN14 398 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
PNKP-221ENST00000627317 DNERQ8NFT8 737 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
PNKP-221ENST00000627317 GDF15Q99988 308 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 ZMYND12Q9H0C1 365 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 COL20A1Q9P218 1284 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
PNKP-221ENST00000627317 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 B4DLN1 442 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 MEIS2O14770 477 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 SLC34A2O95436 690 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 ALDH5A1P51649 535 aaPredicted RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 SLC39A5Q6ZMH5 540 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 RNF180Q86T96 592 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 REXO1Q8N1G1 1221 aaKnown RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 TSEN34Q9BSV6 310 aaKnown RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 PCDH10Q9P2E7 1040 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 GNEQ9Y223 722 aaKnown RBP16.85■□□□□ 0.29
PNKP-221ENST00000627317 MCM3APO60318 1980 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 SZT2Q5T011 3432 aa16.85■□□□□ 0.29
PNKP-221ENST00000627317 A0A1W2PQ45 241 aaPredicted RBP16.84■□□□□ 0.29
PNKP-221ENST00000627317 A0A1W2PQY0 241 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 EIF2AK2P19525 551 aaKnown RBP16.84■□□□□ 0.29
PNKP-221ENST00000627317 GJA9P57773 515 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 RTP1P59025 263 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 FBXO16Q8IX29 292 aaPredicted RBP16.84■□□□□ 0.29
PNKP-221ENST00000627317 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 EHMT1Q9H9B1 1298 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 PDGFCQ9NRA1 345 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 KCNJ14Q9UNX9 436 aa16.84■□□□□ 0.29
PNKP-221ENST00000627317 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.28
PNKP-221ENST00000627317 SMPD1P17405 629 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 SYN1P17600 705 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 PTGS1P23219 599 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 GJB2P29033 226 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 ACLYP53396 1101 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 PDE4DQ08499 809 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 TMEM63BQ5T3F8 832 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 FERMT2Q96AC1 680 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 C8orf76Q96K31 380 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 BRMS1Q9HCU9 246 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 VTA1Q9NP79 307 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 PCDHA4Q9UN74 947 aa16.83■□□□□ 0.28
PNKP-221ENST00000627317 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
PNKP-221ENST00000627317 FOSP01100 380 aaPredicted RBP16.82■□□□□ 0.28
PNKP-221ENST00000627317 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
PNKP-221ENST00000627317 BMP8BP34820 402 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 MAGEA10P43363 369 aaPredicted RBP16.82■□□□□ 0.28
PNKP-221ENST00000627317 FXR1P51114 621 aaKnown RBP eCLIP16.82■□□□□ 0.28
PNKP-221ENST00000627317 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 BECN1Q14457 450 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 TRIM60Q495X7 471 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 MCTP2Q6DN12 878 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 BLIDQ8IZY5 108 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 DAGLBQ8NCG7 672 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
PNKP-221ENST00000627317 PHF20Q9BVI0 1012 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 GJB4Q9NTQ9 266 aa16.82■□□□□ 0.28
PNKP-221ENST00000627317 FRMPD4Q14CM0 1322 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 MOXD2PA6NHM9 499 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 CLK2P49760 499 aaKnown RBP16.81■□□□□ 0.28
PNKP-221ENST00000627317 GUCY1B3Q02153 619 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 KCNA10Q16322 511 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 KRT40Q6A162 431 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 RASGRP4Q8TDF6 673 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 IWS1Q96ST2 819 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 ANO3Q9BYT9 981 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 TMEM260Q9NX78 707 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 PCDHA6Q9UN73 950 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms