RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MOCS3O95396 460 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 NOVP48745 357 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 TNNI2P48788 182 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
VARS2-213ENST00000625423 PICALMQ13492 652 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 TRIM58Q8NG06 486 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 GJA10Q969M2 543 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 SH2D4AQ9H788 454 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
VARS2-213ENST00000625423 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 HPCAL4Q9UM19 191 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 SNX12Q9UMY4 172 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 AFF2P51816 1311 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 TULP2O00295 520 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 TACC1O75410 805 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 UBE2SQ16763 222 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 JRKLQ9Y4A0 524 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 AKR1B10O60218 316 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 RNF40O75150 1001 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 SYF2O95926 243 aaKnown RBP12.5□□□□□ -0.41
VARS2-213ENST00000625423 ATP2B4P23634 1241 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 PDIA5Q14554 519 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 ECM1Q16610 540 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 CREG2Q8IUH2 290 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
VARS2-213ENST00000625423 COG1Q8WTW3 980 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 FAM204AQ9H8W3 233 aa12.5□□□□□ -0.41
VARS2-213ENST00000625423 FGFR1OPO95684 399 aaKnown RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 AKR1B1P15121 316 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 LRRC63Q05C16 580 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 LEKR1Q6ZMV7 388 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
VARS2-213ENST00000625423 VPS72Q15906 364 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 RIN2Q8WYP3 895 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 PSMB7Q99436 277 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 POLLQ9UGP5 575 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 GAKO14976 1311 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
VARS2-213ENST00000625423 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 ANKRD13CQ8N6S4 541 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 BAP1Q92560 729 aa12.49□□□□□ -0.41
VARS2-213ENST00000625423 LCA5LO95447 670 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 CXCR5P32302 372 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 EHHADHQ08426 723 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 DAGLAQ9Y4D2 1042 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 ABCB11O95342 1321 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 MAGEA1P43355 309 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 MRPS25P82663 173 aaKnown RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
VARS2-213ENST00000625423 CACNA2D4Q7Z3S7 1137 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 TSG101Q99816 390 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 SMARCAL1Q9NZC9 954 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 SALL4Q9UJQ4 1053 aa12.48□□□□□ -0.41
VARS2-213ENST00000625423 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
VARS2-213ENST00000625423 MARCH6O60337 910 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
VARS2-213ENST00000625423 TTBK2Q6IQ55 1244 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 MYOCDQ8IZQ8 938 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 HDAC7Q8WUI4 952 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
VARS2-213ENST00000625423 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 EHD2Q9NZN4 543 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
VARS2-213ENST00000625423 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 NCK2O43639 380 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 SSBP05455 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
VARS2-213ENST00000625423 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 SLC16A2P36021 539 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 GGCXP38435 758 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 GTF2IP78347 998 aa12.47□□□□□ -0.41
VARS2-213ENST00000625423 KCNMA1Q12791 1236 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms