RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 CXCL17Q6UXB2 119 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 SLC43A3Q8NBI5 491 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 BADQ92934 168 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 NCOA5Q9HCD5 579 aaKnown RBP14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 FAM217BQ9NTX9 383 aaPredicted RBP14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 SLC12A7Q9Y666 1083 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
SH2D3A-208ENST00000599563 GOLGA8AA7E2F4 631 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 EIF3JO75822 258 aaKnown RBP14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 PLEKHA8P1O95397 391 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 TIMP1P01033 207 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 KCNV1Q6PIU1 500 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 SYNE3Q6ZMZ3 975 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 SH3RF1Q7Z6J0 888 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 FAM126BQ8IXS8 530 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 NECAB1Q8N987 351 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 PIGSQ96S52 555 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 PXMP2Q9NR77 195 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 SEC63Q9UGP8 760 aaKnown RBP14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 TBX21Q9UL17 535 aa14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
SH2D3A-208ENST00000599563 SCN10AQ9Y5Y9 1956 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 MYH7BA7E2Y1 1941 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 A6NJR5 290 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 GCOM1H8Y6P7 765 aaPredicted RBP14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 POLR2MP0CAP2 368 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 METAP2P50579 478 aaKnown RBP eCLIP14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 FPGSQ05932 587 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 SCRN1Q12765 414 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 ITGA7Q13683 1181 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 ANKRD1Q15327 319 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 MTG1Q9BT17 334 aaPredicted RBP14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 LIMCH1Q9UPQ0 1083 aa14.76□□□□□ -0.05
SH2D3A-208ENST00000599563 CNTNAP5Q8WYK1 1306 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 CYTH3O43739 400 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 PFKFB2O60825 505 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 PPP1R11O60927 126 aaPredicted RBP14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 GH1P01241 217 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 CD4P01730 458 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 NR3C2P08235 984 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 SUPT20HL2P0C7V6 817 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 RTN1Q16799 776 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 CCDC83Q8IWF9 413 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 TMEM199Q8N511 208 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 SNX21Q969T3 373 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 ZNF274Q96GC6 653 aaPredicted RBP14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 COL20A1Q9P218 1284 aa14.75□□□□□ -0.05
SH2D3A-208ENST00000599563 SOX1O00570 391 aaPredicted RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 OPLAHO14841 1288 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 STAM2O75886 525 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 ADD1P35611 737 aaKnown RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 PURAQ00577 322 aaKnown RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 PTPN11Q06124 597 aaPredicted RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 PPIGQ13427 754 aaKnown RBP eCLIP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 CCDC62Q6P9F0 684 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 FANCBQ8NB91 859 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 CUL5Q93034 780 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 GTF3C6Q969F1 213 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 LRCH3Q96II8 777 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 TMX3Q96JJ7 454 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
SH2D3A-208ENST00000599563 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 MYL3P08590 195 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 TGFB3P10600 412 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 CCND2P30279 289 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 RCAN1P53805 252 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 LAMC2Q13753 1193 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 NTRK3Q16288 839 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 TMEM63BQ5T3F8 832 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 SEPT14Q6ZU15 432 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 VSIG10LQ86VR7 867 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 TEX2Q8IWB9 1127 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 SRBD1Q8N5C6 995 aaKnown RBP14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 EMID1Q96A84 441 aaPredicted RBP14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 RBM28Q9NW13 759 aaKnown RBP14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
SH2D3A-208ENST00000599563 HOXA13P31271 388 aaPredicted RBP14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 FUT2Q10981 343 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 PGM5Q15124 567 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 SHHQ15465 462 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 GNPTABQ3T906 1256 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 FAM109BQ6ICB4 259 aaPredicted RBP14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 XRRA1Q6P2D8 792 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 NFRKBQ6P4R8 1299 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
SH2D3A-208ENST00000599563 CCDC82Q8N4S0 544 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms