RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
C19orf54-206ENST00000596940 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
C19orf54-206ENST00000596940 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
C19orf54-206ENST00000596940 CXXC1Q9P0U4 656 aaPredicted RBP16.28■□□□□ 0.2
C19orf54-206ENST00000596940 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
C19orf54-206ENST00000596940 ZBBXA8MT70 800 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 GRXCR1A8MXD5 290 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
C19orf54-206ENST00000596940 KIF5BP33176 963 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 TROAPQ12815 778 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 CHST3Q7LGC8 479 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 SESTD1Q86VW0 696 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 C7orf31Q8N865 590 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 CAGE1Q8TC20 777 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 SCLYQ96I15 445 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 MAP3K14Q99558 947 aa16.27■□□□□ 0.2
C19orf54-206ENST00000596940 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
C19orf54-206ENST00000596940 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
C19orf54-206ENST00000596940 PBX2P40425 430 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
C19orf54-206ENST00000596940 PTGISQ16647 500 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
C19orf54-206ENST00000596940 PIGSQ96S52 555 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 LZTS2Q9BRK4 669 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 PDCD2LQ9BRP1 358 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 PCDHA11Q9Y5I1 949 aa16.26■□□□□ 0.19
C19orf54-206ENST00000596940 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 OPLAHO14841 1288 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
C19orf54-206ENST00000596940 IQCF3P0C7M6 154 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 SMARCA1P28370 1054 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 CCND2P30279 289 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 GNAQP50148 359 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 IGDCC4Q8TDY8 1250 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 AFAP1L1Q8TED9 768 aa16.25■□□□□ 0.19
C19orf54-206ENST00000596940 FTOQ9C0B1 505 aaKnown RBP eCLIP16.25■□□□□ 0.19
C19orf54-206ENST00000596940 RBM8AQ9Y5S9 174 aaKnown RBP16.25■□□□□ 0.19
C19orf54-206ENST00000596940 STAM2O75886 525 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 DDAH1O94760 285 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
C19orf54-206ENST00000596940 MCM5P33992 734 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 PGM5Q15124 567 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 GNPTABQ3T906 1256 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
C19orf54-206ENST00000596940 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
C19orf54-206ENST00000596940 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 SEC63Q9UGP8 760 aaKnown RBP16.24■□□□□ 0.19
C19orf54-206ENST00000596940 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
C19orf54-206ENST00000596940 KIF28PB7ZC32 967 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 CALM1P0DP23 149 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 CALM2P0DP24 149 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 CALM3P0DP25 149 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 CELF3Q5SZQ8 465 aaKnown RBP16.23■□□□□ 0.19
C19orf54-206ENST00000596940 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
C19orf54-206ENST00000596940 KAT2BQ92831 832 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 CUL5Q93034 780 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 TMEM87BQ96K49 555 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 SPZ1Q9BXG8 430 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 NKX2-4Q9H2Z4 354 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 PRDM12Q9H4Q4 367 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 GTF2IRD1Q9UHL9 959 aa16.23■□□□□ 0.19
C19orf54-206ENST00000596940 LCTP09848 1927 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 PRC1O43663 620 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 CYTH3O43739 400 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 F2P00734 622 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 SELPP16109 830 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 PSEN2P49810 448 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 PPP2R2DQ66LE6 453 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 XRRA1Q6P2D8 792 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 ZNF654Q8IZM8 581 aa16.22■□□□□ 0.19
C19orf54-206ENST00000596940 COL25A1Q9BXS0 654 aaPredicted RBP16.22■□□□□ 0.19
C19orf54-206ENST00000596940 RGS20O76081 388 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 GGPS1O95749 300 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 HOXD8P13378 290 aaPredicted RBP16.21■□□□□ 0.19
C19orf54-206ENST00000596940 KCNJ6P48051 423 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 ANTXR2P58335 489 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 RBL2Q08999 1139 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 PTK7Q13308 1070 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 NEDD9Q14511 834 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 MFSD10Q14728 455 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 GDF6Q6KF10 455 aaPredicted RBP16.21■□□□□ 0.19
C19orf54-206ENST00000596940 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
C19orf54-206ENST00000596940 LY9Q9HBG7 655 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms