RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CXCL17Q6UXB2 119 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 NEK1Q96PY6 1258 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 MUC6Q6W4X9 2439 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 CTAGE5O15320 804 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 REC8O95072 547 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 MYL3P08590 195 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 TXNP10599 105 aaKnown RBP12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 ITGB8P26012 769 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 EPHB4P54760 987 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 FPGSQ05932 587 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 FAAP100Q0VG06 881 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 ITGA7Q13683 1181 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 SCN5AQ14524 2016 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 KCNV1Q6PIU1 500 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 TAAR1Q96RJ0 339 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 MTG1Q9BT17 334 aaPredicted RBP12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 ZNF576Q9H609 170 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 RBM28Q9NW13 759 aaKnown RBP12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 COL20A1Q9P218 1284 aa12.24□□□□□ -0.45
CLPTM1-211ENST00000589347 CYTH3O43739 400 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 PPP1R11O60927 126 aaPredicted RBP12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 GH1P01241 217 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 NR3C2P08235 984 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 CCND2P30279 289 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 FGD1P98174 961 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 PPIGQ13427 754 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 SEPT14Q6ZU15 432 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 FAM126BQ8IXS8 530 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 MRVI1Q9Y6F6 885 aa12.23□□□□□ -0.45
CLPTM1-211ENST00000589347 OPLAHO14841 1288 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 STAM2O75886 525 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TIMP1P01033 207 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 CDK7P50613 346 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 MRPS5P82675 430 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 PURAQ00577 322 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 PGM5Q15124 567 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 DHX32Q7L7V1 743 aaKnown RBP12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TMEM199Q8N511 208 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 SLC43A3Q8NBI5 491 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TIFAQ96CG3 184 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 PDCD2LQ9BRP1 358 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 LRRC2Q9BYS8 371 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 TBX21Q9UL17 535 aa12.22□□□□□ -0.45
CLPTM1-211ENST00000589347 FRMPD4Q14CM0 1322 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 A6NJR5 290 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 RXRAP19793 462 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 HOXA13P31271 388 aaPredicted RBP12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 RCAN1P53805 252 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 RTN1Q16799 776 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 PSRC1Q6PGN9 363 aaPredicted RBP12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 APOA5Q6Q788 366 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 EHMT1Q9H9B1 1298 aa12.21□□□□□ -0.45
CLPTM1-211ENST00000589347 MYH9P35579 1960 aaKnown RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 GOLGA8AA7E2F4 631 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 GOLGA8BA8MQT2 603 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 ZBTB43O43298 467 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 EPB41L2O43491 1005 aaKnown RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 ARIH2O95376 493 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 CD4P01730 458 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 MMP3P08254 477 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 PSMA5P28066 241 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 PSMC6P62333 389 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 ARHGAP1Q07960 439 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 DGKDQ16760 1214 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 FAM47CQ5HY64 1035 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 PPP1R18Q6NYC8 613 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms